Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2479 ATGGGAGGCTTCGACATGGGTGGTGGGAAGCAAAGGTATGGGATGGTGCAGTGTAGTAGAGACCTCACCGATATGGGGTGTGAACAGTGCTTGGAGGCTATGGTGGACAAGGTCCCTCAGTGCTGTGAGGAGAAGCAGGGATGGCAGGTCTTGGCTCCTAGTTGTTTGATCAAGTATGATGATTATATGTTTTACCAGATTAAGAATCAAACGACGTCAAGTGACTCAAGTCCTAGTCTTAATGCAGGGAGTAACAGTATTAACAAGTGGAAAGCCTTGATCATAAGCATCAGTGTATTAGTGGCAGTAGCTATACTAAGTTGCAGTGTCTACTGCTTTTGGAGAAGGAAGTTAAAGAAAGATGAAATGCCATCTGAGTCCGCTCCTACGATTCTTGGCCTTTCTCAAAGAGAGATTCCATTGAACAAAGATCTCCCCACAATCCCTTTGATTTCAATTCTTGAGAGCACTCAAAACTTCTCAGATGCATCTAAATTGGGAGAAGGTGGATTTGGTCCTGTTTACAAGGGAACTTTGCCAGATGGGAGGGAAGTTGCTATCAAAAGGCTGTCAAAAACTTCAGGTCAAGGCTCAAAGGAGTTTAGGAATGAAGTATTATTCATAGCCAAGTTGCAACATAGAAACCTTGTAAGACTCTTGGGTTGCTGCATTGAGGAAACTGAAAAGCTACTTGTGTATGAGTACATGCCAAATTCCAGCCTTGACTCTCACATTTTCAATGAGGAGAAAAGAAAGAAACTAGATTGGAAACTAAGGTTGGGCATTATTAATGGAATTGCAAAAGGACTTCTATACCTTCATGAGGATTCTCGCCTTAGGGTAATCCATAGAGATTTGAAAGCTAGTAACGTTCTTCTGGATAGTGAGATGAATCCTAAAATATCAGATTTTGGACTAGCAAAGTCTTTCGAAGGAGGCCAAAATCAAGGAAATACGAAAAGAGTAATGGGTACTTATGGATATATGGCTCCAGAGTATGCTATGGAAGGATTCTTTTCAGTGAAATCTGATGTTTTCAGCTTTGGAGTTCTTCTGTTAGAAATCATTTGTGGGCAAAGGAATAGTGGTTTCTACATCTCAGAACATGGTCAAAGTCTTACTATTTATACTTGGGGATTGTGGAATGAAGGAAAATGTTTGGAATTGATGGATCCAATACTGGAGGAGTCTTACACAGAAAGTGAAGTTTTGAAGTGCATACACATTGGTTTATTGTGTGTTCAAGCAAATGCAGCAGATAGGCCAACCATGTCCACTGTTATGCTCATGCTTGCAAGTGACACAATGTCCCTTACCAAACCTAATTACCCTGCATTTTCAATTGGAAGAATGGTCATGGGTGAATCATCCACATCAAAAAATTCCAAGGATCCTTCTATCAATGAGGTAACAGTATCTAATGTTGTGCCTCGGGGAAAGCAGAATGAAGAATCAAAAGGGATTGAAGTTTCAGAGGAAAGGAAGGTAGCTGATGAGTTAAGTTATGGATTGAGTAGGGAGGAAGTGGTTATAAATAGGGGTGAAAAAGGTGGTGTGCTCGCTGAAGCACAAGAAGGGCACATGGAGAGTGTTCGTGTGGTGTTATTTTGTTCCATTGAAATCCTTCAGAAAATGATCGGGCTATTCAAAGACTATGGGATCTTTTTACTGTTTGTGTGTGGTGGAAACAAGGGTCCAGCTTGCTAA 1707 0.4107 MGGFDMGGGKQRYGMVQCSRDLTDMGCEQCLEAMVDKVPQCCEEKQGWQVLAPSCLIKYDDYMFYQIKNQTTSSDSSPSLNAGSNSINKWKALIISISVLVAVAILSCSVYCFWRRKLKKDEMPSESAPTILGLSQREIPLNKDLPTIPLISILESTQNFSDASKLGEGGFGPVYKGTLPDGREVAIKRLSKTSGQGSKEFRNEVLFIAKLQHRNLVRLLGCCIEETEKLLVYEYMPNSSLDSHIFNEEKRKKLDWKLRLGIINGIAKGLLYLHEDSRLRVIHRDLKASNVLLDSEMNPKISDFGLAKSFEGGQNQGNTKRVMGTYGYMAPEYAMEGFFSVKSDVFSFGVLLLEIICGQRNSGFYISEHGQSLTIYTWGLWNEGKCLELMDPILEESYTESEVLKCIHIGLLCVQANAADRPTMSTVMLMLASDTMSLTKPNYPAFSIGRMVMGESSTSKNSKDPSINEVTVSNVVPRGKQNEESKGIEVSEERKVADELSYGLSREEVVINRGEKGGVLAEAQEGHMESVRVVLFCSIEILQKMIGLFKDYGIFLLFVCGGNKGPAC 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2479 568 Gene3D Transferase(Phosphotransferase) domain 1 236 442 - -
Bisa02g2479 568 ProSitePatterns Serine/Threonine protein kinases active-site signature. 281 293 IPR008271 GO:0004672|GO:0006468
Bisa02g2479 568 SMART serkin_6 160 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g2479 568 Pfam Protein tyrosine and serine/threonine kinase 164 428 IPR001245 GO:0004672|GO:0006468
Bisa02g2479 568 ProSiteProfiles Protein kinase domain profile. 160 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g2479 568 Gene3D - 2 64 IPR038408 -
Bisa02g2479 568 SUPERFAMILY Protein kinase-like (PK-like) 146 450 IPR011009 -
Bisa02g2479 568 Gene3D Phosphorylase Kinase; domain 1 133 235 - -
Bisa02g2479 568 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 131 235 - -
Bisa02g2479 568 CDD STKc_IRAK 166 431 - -
Bisa02g2479 568 FunFam Liguleless narrow1 236 439 - -
Bisa02g2479 568 Pfam Salt stress response/antifungal 10 62 IPR002902 -
Bisa02g2479 568 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 11 474 - -
Bisa02g2479 568 ProSiteProfiles Gnk2-homologous domain profile. 1 64 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2479 Bisa-ChrBisa02 62136622 62148878 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2479 7 478 Receptor kinase-like Gene Family AT4G21410 45.918 5.33e-140 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bisa02g2479 PK_Tyr_Ser-Thr 2.5e-48 CL0016