Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2463 ATGAGTCAAATGATGAAAGAGATTGAAAATGAGGTTCTCCTCAAGGATCAGACTGGGTCACATTTAAATGATGAGAGTACTGGAGGAAGTGCTGGTGGAGTTCCCTTGAAGAAAGGGCCATGGACATCTGCTGAAGATGCTATTTTAGTGGACTATGTCACGAAGCATGGTGAGGGGAACTGGAATGCTGTTCAGAAGCACTCAGGCCTGTCTCGTTGTGGCAAAAGCTGTCGGCTGCGGTGGGCAAATCACCTAAGGCCAAATTTAAAGAAAGGTGCATTCACTGCAGAAGAGGAGCGGCTGATTGCTGAACTGCATGCCAAGATGGGAAACAAATGGGCACGCATGGCTGCACATTTGCCTGGTCGGACAGATAATGAGATAAAGAACTATTGGAATACTCGGATCAAGAGGCGGCAACGGGCTGGCTTGCCACTTTATCCTCCTGAAGTGTGTTTGCAATCCATGCAAGAGAGTCAGCATGGCCAAAGCAGTGTTGGAATTAACGGTGGTGATAGAGGAGATAATAGCTTGCTGACGAAAAACAATTATGAGATACACAATGCTATATTTGATAGTCTGAAAGCCAATCAAGGGGCCTTACCTTATGTCCCGAAGCTTCCTGATATTTCAGCTAATAGCATTCTTCTGAAAGGTTTTAGTTCTTCTCAAAATTGTAGTTTTGCACCATCAATGTTGCCTCCTCATAAGCGTCCTCGAGAGTCAACAATGCCATTTCTTGATTCCAGCAATATGAACAGAACTGGATTTTATCCATTTGACCATGGTTGGGAAAATACATCTGATACGATTGCACAATCATTTGAAATGCATTCTCCTATTCATCATGGTTCCTCCTCACAGAATTCACTGTGTTATAGCCATTCACTTTCTAATGGCAATTCCTCTACTTCGAAGCCAACTTCTGAGGCTGTGAAGTTGGAGCTCCCTTCACTCCAATATCCAGAAACCAACTTAGGTTACTGGGAAACATCACCGCTGCCTTCTTTGCTTAAGTCAGTTGATGTTGTAATTCAGTCTCCTCGTCCAAGTAGTGCACTGGAGTCAGATAGTTCTTCACCACAGAATAGTGGTCTTCTGGATGCTTTACTTCATCAGGCAAAGACTCTAAGCAGTTCAAAGAATCATTATATTGACAAGAGTTCAAATTCATCTACCACAACTCCTGGTGATAGAGCTGACAGTTCCACATTGAACATGTATGGGACAGAATGGGAAGACTACATCGACCCTGTTTCTCCATTTGGTGCAACATCAATCTTGAACGAGTGCCTTGCTGTTTGTGCCAATAAATCCTCTTTGGATGAACAACCACCTGCTCAGACCTCAAGTGGCAACATTGTGAAACTAGAATCTGATAACCAAGTTTGGACCCCGAACAGTGAAGATCAGACAATGTGCATGTTGAATTTTGCTGAGCCAGATGGCTTCCTTGCTTCAGATTGGTTTGAACATGGTTCTGGGGGTGGCAAGAGCCAAGCCATCATGACCGACACCATCGCAACTCTTCTTGGTAATGATTTAGCAACTTCTACCTCAAGTCAAGTATGGGGGCTTGGTTCTGGTGCATGGAATAACATGCCTGCTGTGTGTCAGATGTCTAATCTTCCCTGA 1635 0.441 MSQMMKEIENEVLLKDQTGSHLNDESTGGSAGGVPLKKGPWTSAEDAILVDYVTKHGEGNWNAVQKHSGLSRCGKSCRLRWANHLRPNLKKGAFTAEEERLIAELHAKMGNKWARMAAHLPGRTDNEIKNYWNTRIKRRQRAGLPLYPPEVCLQSMQESQHGQSSVGINGGDRGDNSLLTKNNYEIHNAIFDSLKANQGALPYVPKLPDISANSILLKGFSSSQNCSFAPSMLPPHKRPRESTMPFLDSSNMNRTGFYPFDHGWENTSDTIAQSFEMHSPIHHGSSSQNSLCYSHSLSNGNSSTSKPTSEAVKLELPSLQYPETNLGYWETSPLPSLLKSVDVVIQSPRPSSALESDSSSPQNSGLLDALLHQAKTLSSSKNHYIDKSSNSSTTTPGDRADSSTLNMYGTEWEDYIDPVSPFGATSILNECLAVCANKSSLDEQPPAQTSSGNIVKLESDNQVWTPNSEDQTMCMLNFAEPDGFLASDWFEHGSGGGKSQAIMTDTIATLLGNDLATSTSSQVWGLGSGAWNNMPAVCQMSNLP 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2463 544 FunFam Transcription factor GAMYB 93 139 - -
Bisa02g2463 544 SUPERFAMILY Homeodomain-like 35 132 IPR009057 -
Bisa02g2463 544 CDD SANT 40 85 IPR001005 -
Bisa02g2463 544 Gene3D - 93 139 - -
Bisa02g2463 544 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 6 520 - -
Bisa02g2463 544 Pfam Myb-like DNA-binding domain 38 85 IPR001005 -
Bisa02g2463 544 Pfam Myb-like DNA-binding domain 91 134 IPR001005 -
Bisa02g2463 544 MobiDBLite consensus disorder prediction 15 37 - -
Bisa02g2463 544 Gene3D - 37 90 - -
Bisa02g2463 544 FunFam MYB-related transcription factor 37 90 - -
Bisa02g2463 544 MobiDBLite consensus disorder prediction 381 405 - -
Bisa02g2463 544 ProSiteProfiles Myb-like domain profile. 86 136 IPR001005 -
Bisa02g2463 544 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 86 140 IPR017930 -
Bisa02g2463 544 CDD SANT 93 134 IPR001005 -
Bisa02g2463 544 SMART sant 37 87 IPR001005 -
Bisa02g2463 544 SMART sant 90 138 IPR001005 -
Bisa02g2463 544 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 33 85 IPR017930 -
Bisa02g2463 544 ProSiteProfiles Myb-like domain profile. 33 85 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2463 Bisa-ChrBisa02 61737438 61750029 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2463 36 537 MYB Transcription Factor Family AT3G11440 44.508 6.40e-119 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa02g2463 Myb_DNA-binding 3.1e-14 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g1674 12 31550331 31554403 Bisa02g2463 02 61737438 61750029 CCT