Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2462 ATGGAAGTGGCAAGGATACCTATTTTGAACCTCAGGTTCTTGATCAATATGACGCCAGTTTGCCCTTTTGTCAAAGCTTCTCGCCCTGATGATACCACTTCAAAAAAATCGGGAAAAAATTCAGTTAAGCATCAGGCGGAGTCTGAGAGTAAGGCAAAAAAAGAGTCTAATGACTCAGCTAGTGTTTCTCCAAAGTGCCCGTTTGGATATGATTCCCAAACATTTAAGATTGGTCCTCTTAGCTGTATGATATGCCAGGCACTCCTTTTTGAAAGTAGCAAATGTGTGCCATGTTCTCATGCCTTCTGCAAAGCATGTATATCACGCTTTAAGGACTGTCCATTATGTGGAGCTGATATTGAGAAGATTGAGCCTGATGCTATTCTTCAGGGTATGGTTGATCGCTTTATTGAAGGTCATGCTAGAATCAAAAGATCTATAAGTTCAGGCAAAGGAGAAGCAGAAGAGAGTAAACTGGTTATATATGAGGATGTATCTTTGGAAAGGGGTTCTTTCTTAGTGCAACAGGCCATGAGGGCACTCCGCGCTCAGAATATAGTAAGTGCCAAATCAAGGCTCAGTCTCTGTGCAGAAGACATTCGAGGCCAGTTAGAAAAAATGGGTAACATGTCGGAATTATGTTCACAGCTTGGAGCAGTCTTGGGTATGCTTGGTGACTGCTGCCGAGCTATGGGGGATTCTAGTTCTGCAGTTGCTTATTTTGAAGAAAGTGTTGAATTTCTCTCACAGTTGCCAAAAGATGACTTGGAGATTACACATACACTTTGTGTTTCGCTTAATAAAATTGGAGATCTTAAATATTATGATGGAGACCTGCAAGCTGCAAGATCTTACTATTTTCGATCTTTGAATGTTCGCCGTGATGTAGTTAAGCATAATTCAGATGTTCCATCCCAGGTTCTAGATGTTGCTGTGTCTCTTGCAAAAGTTGCTGATGTGGAGAGGAATCTAGGAAACGAAACTCTGGCTACCAATGGATTTCAAGAAGCTATAGACTTGTTGGAATCATCGACGTTGAAATCTGAAGCCAGTGGACTTGAGCAACGGCGACTTTCAGTGCTGGATTTCCTTAGAAGCCAACTTGCAGATAAACAAGAACAAACTGAGACAACGGTTTAA 1140 0.4158 MEVARIPILNLRFLINMTPVCPFVKASRPDDTTSKKSGKNSVKHQAESESKAKKESNDSASVSPKCPFGYDSQTFKIGPLSCMICQALLFESSKCVPCSHAFCKACISRFKDCPLCGADIEKIEPDAILQGMVDRFIEGHARIKRSISSGKGEAEESKLVIYEDVSLERGSFLVQQAMRALRAQNIVSAKSRLSLCAEDIRGQLEKMGNMSELCSQLGAVLGMLGDCCRAMGDSSSAVAYFEESVEFLSQLPKDDLEITHTLCVSLNKIGDLKYYDGDLQAARSYYFRSLNVRRDVVKHNSDVPSQVLDVAVSLAKVADVERNLGNETLATNGFQEAIDLLESSTLKSEASGLEQRRLSVLDFLRSQLADKQEQTETTV 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2462 379 SMART tpr_5 311 344 IPR019734 GO:0005515
Bisa02g2462 379 SMART tpr_5 218 251 IPR019734 GO:0005515
Bisa02g2462 379 SMART tpr_5 263 296 IPR019734 GO:0005515
Bisa02g2462 379 SUPERFAMILY RING/U-box 77 123 - -
Bisa02g2462 379 SUPERFAMILY TPR-like 219 340 IPR011990 GO:0005515
Bisa02g2462 379 SMART ring_2 82 116 IPR001841 -
Bisa02g2462 379 ProSitePatterns Zinc finger RING-type signature. 98 107 IPR017907 -
Bisa02g2462 379 PANTHER RING FINGER PROTEIN 41, 151 63 364 - -
Bisa02g2462 379 MobiDBLite consensus disorder prediction 29 58 - -
Bisa02g2462 379 ProSiteProfiles Zinc finger RING-type profile. 82 116 IPR001841 -
Bisa02g2462 379 MobiDBLite consensus disorder prediction 28 63 - -
Bisa02g2462 379 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 78 159 IPR013083 -
Bisa02g2462 379 Gene3D Tetratricopeptide repeat domain 197 359 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2462 Bisa-ChrBisa02 61643104 61669861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2462 80 132 C3H Transcription Factor Family AT2G30580 32.812 4.92e-06 46.2