Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2459 ATGCAGGGAGGGTCAGGTCAAAATAACTCAATTCCTCCTTCAGGGTCCATTGATAAGTCAAGGGTTTTAGATGTTAAACCTCTTCGTAGTTTGGAACCTGTGTTTCCAGATTCAGCGCAGGCTCCTTCCTTTGATGGCTCGTGTCCCTCTGGCTTTTATCCCTTTTTCCCATTTGGCGGACCTCGACCTCAAGCACGTCAAGCTTCGCCTCCTAGGGTTCCGATGCCGACTCCCTTACGGTCATTTCGAAGCCCGGAAGTGGGAGAAGCAACCCCACCTGAGTTTCCTGGAGCATCTAATGGGGAATTTACTGATAACCCAAAACGTGCAGGACCAAACAGATCCAGATCATCCCAAAAGAAGGCTAAGAAGAGTCAAGATCTACAAATTGATGTAACTTCTTTAATAGGTATTAGCATAAACGAACGGACAGAGGGTAATCGGGAGGTGGTTAATCTTGTACTGATGACATTTGATGGGCTTAGAAGAAGGCTCAGCCAACTTGAAGATGCCAAGGAACTGACTCCAGGGTTAGTCAAGCGTGCGGATATGAGAGCTGGGAATGTTTTGATGAGTACAGGGATTCGAACAAACAATAAGAAAAGAATAGGAGCAGTGCCTGGTGTTGAGATTGGGGACATTTTCTTTTTCCGACTAGAATTATGTATTGTGGGGTTGCATAGTCAGTCTATGGGTGGAATTGACTACACGACTATGAAGGGTGAGTTTGAGGATGAGCCGGTGGCTTTAGGCATTGTTTCATCAGGAAAATATGATGACCATACGGAGGACAGTGATGTTTTGGTCTATAGTGGCCAGGGTGGGGAGAAAGGGGATGATCAGAAGCTAGAAAGGGGTAATCTTGCTCTAGAAAGAAGTTTGCGACGGAAGAATGAAGTAAGAGTGATCCGGGGCATGAAAGATCCTATGAATCCAAATTCAAAGGTCTATCTCTATGATGGGCTGTATAAAATCCAGGATTCATGGATAGAAAAGGGGAAATCTGGTGGTGGTGTATTTAAGTACAAGTTTGTGAGAATTCCTGGGCAGTTCAGTCCCTTTGCTCTTTGGAAATCTATCGAAAAGTGGAAGGCTGGCATCACTTCCAGGACAGGGCTCATTCTTGCAGACCTTGCCTCAGGAGCTGAGAAATTTCCTGTATCACTTTTCAACGATGTTGATGGTGAGAAGGCACCTGGTTATTTCACTTATCTTCATTCTCTCAGACATTCAAAATCCTCGATGGTGTCACAGTCTTCTAATGGCTGCAACTGTCATAAAGATTGTGTCCCTGGTGATTTGAACTGCTCTTGCATCCGGAGAAATGAAGGTGATTTTCCATACACTGGCAACAGCATTTTAGTGAGTTGGAAGCAATTGGTTCATGAATGTGGCCCTACATGTCAGTGTCTTCCTAACTGCAAAAATCGAGTATCCCAGACTGGTTTAAAGTTTCCTAACTGCAAAAATCGAGTATCCCAGACTGGTTTAAAGTACCATATGGAAGTGTTCAAAACGAAGGATAGAGGATGGGGTCTTCGATCACTGGATCCTATTCGTGCAGGTACTTTTATTTGTGAATATGCAGGAGAAGTTATTGACAGGTACAAGGCAAGTCAGAATGGAGGTAATGATGAGTATGTTTTCGATACAACCCGTACTTATGCTCCATTCAAGTGGAACTATGAACCTAAGTTACTAGAAGAAGTGGGTTCAAATGATTCTACTGGGGATTACAGTATTCCATCTCCTCTAATTATTAGTGCCAAGAATGTTGGAAATGTGGCTAGATTCATGAATCATAGTTGCTCCCCAAATGTTTTCTGGCAGCCAGTTATATATGAAGAAAACAATCAATCTTTCCTTCATATTGCTTTTTTCGCCCTTAGACACATTTCCCCGCTGACAGAATTGACATATGATTACGGGATTGCACGTTCTGATTCTATGGCGGGCAGCAGTGCATCCAAATGGAAGAAGAAATGCTTATGTGGATCATCAAAATGCCGGGGTTCTTTTGCATGA 2025 0.4346 MQGGSGQNNSIPPSGSIDKSRVLDVKPLRSLEPVFPDSAQAPSFDGSCPSGFYPFFPFGGPRPQARQASPPRVPMPTPLRSFRSPEVGEATPPEFPGASNGEFTDNPKRAGPNRSRSSQKKAKKSQDLQIDVTSLIGISINERTEGNREVVNLVLMTFDGLRRRLSQLEDAKELTPGLVKRADMRAGNVLMSTGIRTNNKKRIGAVPGVEIGDIFFFRLELCIVGLHSQSMGGIDYTTMKGEFEDEPVALGIVSSGKYDDHTEDSDVLVYSGQGGEKGDDQKLERGNLALERSLRRKNEVRVIRGMKDPMNPNSKVYLYDGLYKIQDSWIEKGKSGGGVFKYKFVRIPGQFSPFALWKSIEKWKAGITSRTGLILADLASGAEKFPVSLFNDVDGEKAPGYFTYLHSLRHSKSSMVSQSSNGCNCHKDCVPGDLNCSCIRRNEGDFPYTGNSILVSWKQLVHECGPTCQCLPNCKNRVSQTGLKFPNCKNRVSQTGLKYHMEVFKTKDRGWGLRSLDPIRAGTFICEYAGEVIDRYKASQNGGNDEYVFDTTRTYAPFKWNYEPKLLEEVGSNDSTGDYSIPSPLIISAKNVGNVARFMNHSCSPNVFWQPVIYEENNQSFLHIAFFALRHISPLTELTYDYGIARSDSMAGSSASKWKKKCLCGSSKCRGSFA 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2459 674 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 64 486 - -
Bisa02g2459 674 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 65 674 IPR025794 GO:0016571
Bisa02g2459 674 Gene3D - 187 367 IPR036987 -
Bisa02g2459 674 Pfam Pre-SET motif 379 477 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Bisa02g2459 674 SUPERFAMILY SET domain 385 671 IPR046341 -
Bisa02g2459 674 Gene3D SET domain 486 673 IPR046341 -
Bisa02g2459 674 Gene3D SET domain 368 485 IPR046341 -
Bisa02g2459 674 MobiDBLite consensus disorder prediction 55 126 - -
Bisa02g2459 674 FunFam Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 187 365 - -
Bisa02g2459 674 ProSiteProfiles YDG domain profile. 204 346 IPR003105 -
Bisa02g2459 674 MobiDBLite consensus disorder prediction 1 24 - -
Bisa02g2459 674 SMART G9a_1 199 350 IPR003105 -
Bisa02g2459 674 Pfam SET domain 510 643 IPR001214 GO:0005515
Bisa02g2459 674 ProSiteProfiles Pre-SET domain profile. 421 482 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Bisa02g2459 674 SMART preset_2 375 469 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Bisa02g2459 674 ProSiteProfiles Post-SET domain profile. 658 674 IPR003616 -
Bisa02g2459 674 MobiDBLite consensus disorder prediction 1 16 - -
Bisa02g2459 674 SUPERFAMILY PUA domain-like 186 368 IPR015947 -
Bisa02g2459 674 ProSiteProfiles SET domain profile. 499 643 IPR001214 GO:0005515
Bisa02g2459 674 SMART set_7 499 649 IPR001214 GO:0005515
Bisa02g2459 674 Pfam SAD/SRA domain 203 350 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2459 Bisa-ChrBisa02 61594849 61596873 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2459 1 674 Su(var)3-9 homologs AT1G73100 50.502 0.0 673
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bisa02g2459 SAD_SRA 5.9e-46 CL0178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g1677 12 31612829 31614820 Bisa02g2459 02 61594849 61596873 CCT
Bisa02g2459 02 61594849 61596873 Bisa02g2459 02 61594849 61596873 ECH