Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2451 ATGGATATAGATCTTAGGTTACCTTCTGGTGAGCATGATAAAGAGGATGAAGAACCAAATACACTTGACAACATATTGGATGGTGAAGAAAAATTGCATAATGTAGATATAGAAGGCAGAAATATAGTTGATGCAAGTGTTGAGGTACATTCTCTAGATGGTGGAGATTTGAATTCACCCACTTTGGATATGGTAATGTTTAAGGAAGATACGAATCTTGAGCCGATTTCTGGGATGGAATTTGAGTCTCATGGGGAAGCTTATTCTTTCTACCAAGAGTATGCTCGGTCAATGGGATTCAATACTGCAATTCAAAATAGTCGGCGTTCAAAAACATCAAGAGAATTTATAGATGCAAAGTTTGCTTGTTCCAGATATGGAACAAAACGAGAGTATGACAAATCATTCAATCGACCACGTGCAAGACAGAACAAGCCAGAGTCTGAAAATTTAACTGGTCGGAGATCTTGTACAAAGACTGACTGTAAAGCAAGCATGCATGTGAAAAGGAGGTCAGATGGAAAATGGGTTATACATAGTTTTGTGAAGGAGCATAACCACGAGCTTTTACCAGCCCAAGCTGTCAGTGAACAAGCAAGAAGAATGTATGCTGCAATGGCTAGACAGTTTGCTGAATACAAAACTGTAGTTGGTCTAAAGAATGAGAAAAGCCCATTTGACAAAGGTCGGAATTTTGGCCTGGAGACAGGGGATGCCAAACTTCTGCTTGATTTTTTTATACAGATGCAGAATATGAATTCTAACTTCTATTATGCAGTTGACATTGGTGAGGATCAACGGGTGAAAAACCTTTTGTGGGTTGATGCTAAAAGTAGGCATGACTATATCAACTTTTGCGATGTAGTGTCTTTTGACACCACCTATGTTAGAAACAAATATAAGATGCCTCTTGCACTTTTTGTTGGAGTGAATCAGCACTATCAATTTATTTTGCTTGGGTGTGCATTGATATCAGATGAAACTGCCACAACTTATTCTTGGCTGATGCGGACATGGCTAAAAGCATTTGGAGGTCAAGTTCCGAAAGTATTAATTACTGATCATGACAAGACATTGAAGTCAGTTGTTTCAGATGTCTTTCCTAATGCTCATCATTGTGTGTGTCTGTGGAACATATTGGGGAAGGTATCTGAAAGTTTGGCTCATGTCATTAAACGGCACGAGAATTTTATGGCAAAATTTGAAAAATGCATCTATAGGTCATGGACGAGTGATGAATTTGAGAAGAGGTGGTGGAAAATTGTTGATAGGTTTGAACTCGGGGAGGATGAATGCATGCAGACATTGTATGAAGATTGCAAGTTATGGGTGCCAACATTCATGAGGGATGTATGTTTAGGTGGTATGTCTACTGTCCAGCGATCTGAAAGTGTAAATTCCTTCTTTGATAAATATTTTCATAAGAAGACTTCTGTACAAGATTTTGTTAGACAGTATGAAGGAATGTTGCAAGACAGGTATGAAGAGGAAGCCAAAGCAGATTCTGATACATGGAATAAAGTGGCAACATTAAAAACTCCTTCACCTTTAGAGAAGAGTGTTGCAGGAATTTACACGCATGCAGTATTTAAGAAAATTCAGGTTGAGGTTATTGGTGCAGTTGCTTGTCATCCTAAAGCTGAAAGACAGGATGATGCAAGCATTACTTACAAAGTTCATGATATGGAAAGGGATCAAGACTTCATAGTTGTCTTGAATGAATTAAAATCAGAGGTTTCTTGTATATGTCGATTATTTGAATATAGAGGTTATCTTTGCCGACATGCATTGATTGTTCTTCAATGTTCTCGCCTTTCAGCAATCCCACCTCAATATATTTTGAAACGATGGACAAAAGATGCAAAGTCCAGGCATTTATCTGGAGAAGAATCTGAACATATGCTGGCTAGGGTGCAACGGTATAATGATTTATGTCAGCGAGCACTTAAACTGATTGAAGAGGGATCTCTTTCTCAAGAGAGTTATAGTATTGCATTCCATGCACTACATGAAGCATATGCAAGTTGTGTGAGTGTGAATAATTCTAGTAAAGATCCTATAGAAGCTGGTACATCAGCTGGTCATGGTCAGCTGTGCCCTGAAGAAGATACCCAAAGTAAAAATATGGGCAAGACAAACAAAAAGAAAAATCCTGCTAAAAAGAAAAAGATGAACCCTGAGGCTGAAGTGATGACTGTTGGGGCACCAGAAAACTTGCAACAAATGGACAAATTCAGCCCAAGGGCAGTAACTCTTGACGGTTATTATGGTGCACAACAGAGTGTGCAGGGAATGTTGAACTTAATGGGACCAACACGTGATAATTACTATGGGAACCAGCAGACTATTCAGGGGCTGGGACAACTAAGTTCCATTCCATCAAGTCACGATGGTTATTACGGTGCTCATCAGGGCATGCCTGGTCTGGCACAACTTGATTTTTTCCGAGCATCAACAGGATTTGCTTATGGCATTCGGGATGATCCTAATGTAAGAGCAGCCCAGTTGCATGATGATCCATCAAGACATGCATGA 2535 0.3937 MDIDLRLPSGEHDKEDEEPNTLDNILDGEEKLHNVDIEGRNIVDASVEVHSLDGGDLNSPTLDMVMFKEDTNLEPISGMEFESHGEAYSFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYDKSFNRPRARQNKPESENLTGRRSCTKTDCKASMHVKRRSDGKWVIHSFVKEHNHELLPAQAVSEQARRMYAAMARQFAEYKTVVGLKNEKSPFDKGRNFGLETGDAKLLLDFFIQMQNMNSNFYYAVDIGEDQRVKNLLWVDAKSRHDYINFCDVVSFDTTYVRNKYKMPLALFVGVNQHYQFILLGCALISDETATTYSWLMRTWLKAFGGQVPKVLITDHDKTLKSVVSDVFPNAHHCVCLWNILGKVSESLAHVIKRHENFMAKFEKCIYRSWTSDEFEKRWWKIVDRFELGEDECMQTLYEDCKLWVPTFMRDVCLGGMSTVQRSESVNSFFDKYFHKKTSVQDFVRQYEGMLQDRYEEEAKADSDTWNKVATLKTPSPLEKSVAGIYTHAVFKKIQVEVIGAVACHPKAERQDDASITYKVHDMERDQDFIVVLNELKSEVSCICRLFEYRGYLCRHALIVLQCSRLSAIPPQYILKRWTKDAKSRHLSGEESEHMLARVQRYNDLCQRALKLIEEGSLSQESYSIAFHALHEAYASCVSVNNSSKDPIEAGTSAGHGQLCPEEDTQSKNMGKTNKKKNPAKKKKMNPEAEVMTVGAPENLQQMDKFSPRAVTLDGYYGAQQSVQGMLNLMGPTRDNYYGNQQTIQGLGQLSSIPSSHDGYYGAHQGMPGLAQLDFFRASTGFAYGIRDDPNVRAAQLHDDPSRHA 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2451 844 Pfam MULE transposase domain 288 380 IPR018289 -
Bisa02g2451 844 Pfam SWIM zinc finger 575 602 IPR007527 GO:0008270
Bisa02g2451 844 MobiDBLite consensus disorder prediction 1 20 - -
Bisa02g2451 844 Pfam FAR1 DNA-binding domain 89 191 IPR004330 -
Bisa02g2451 844 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 68 676 IPR031052 GO:0006355
Bisa02g2451 844 ProSiteProfiles Zinc finger SWIM-type profile. 568 604 IPR007527 GO:0008270
Bisa02g2451 844 SMART 26again6 579 606 IPR006564 GO:0008270
Bisa02g2451 844 MobiDBLite consensus disorder prediction 687 727 - -
Bisa02g2451 844 MobiDBLite consensus disorder prediction 132 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2451 Bisa-ChrBisa02 61217637 61220809 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Bisa02g2451 FAR1 1.1e-27 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g1712 12 33201641 33211465 Bisa02g2451 02 61217637 61220809 CCT
Bisa02g2451 02 61217637 61220809 Bisa02g2451 02 61217637 61220809 ECH