LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa02g2449	ATGGGCGTTCAAACTATGAGGTCTCAGGGCGGTGGTGATGGCAATGGAAAACGATCACAATTCCAGCATCCGGTGCGGCAAAACTCAATGTACAGTCTCACGCTTGATGAGGTTCAGAATCAACTAGGTGACTTGGGAAAGCCACTTTGTAGTATGAACCTTGATGAGCTTCTAAAAAATGTATGGACAGCTGAGGCAAATCAGTCCATGAGTATCAGTATTGAGGGCACAGCACAAGCTAGTCAAACTGCTCTGCAGTGTCAGGCTAGTCTGTCCTTAACTAGTGCGCTAAGCAATAAAACGGTTGATGAGGTTTGGAGAGATATCCTACAAAGTAAAAAAAATGAAGAGAAGAAGTCTCAAGATAGGCAGCCTACTTTGGGAGAGATGACATTGGAGGATTTCTTGGTAAAAGCTGGTGTTGTTGCAGAAGTGTCTTCTGATAGAAAGAAAACTGGTCCGGTAGTTGGGTTTGATTCAAATGTCGCAGCACTGCCACTGCAGTTTCCTCAGCAAGGTCAGTGGATCCAGTATCCACAAACACAATATCAGCATTCACAACAAAGTTTATTGGGTATATATATGCCTGGCCAGAGTATAGCACAGCCATTACACATAGGGCTTGGTGTTGCATTGGATATTCCTCTTGTCGATTGTCAGGTGGCAGTACCTTCTCCTTTGATGGGAACTTTGTCAGATACACAGACACCTGGAAGAAAAAGAGGCACTCCAGAGGACATGATAGAGAAGACTGTTGAGAGGAGGCAGAAAAGGATGATCAAGAATCGGGAATCTGCTGCCCGTTCAAGAGCAAGGAAACAGGCTTACACGCATGAATTGGAGAACAAAGTTGCACATCTGGAAGAAGAAAATGAGAGACTGAGGAAACAGAAGGAGTTAGAGAATATGTTGACATGTGCACCGCCTCCTGAGCCTAAATATCAGCTTCGCCGAACATCATCAGCATCTTTCTGA	975	0.4462	MGVQTMRSQGGGDGNGKRSQFQHPVRQNSMYSLTLDEVQNQLGDLGKPLCSMNLDELLKNVWTAEANQSMSISIEGTAQASQTALQCQASLSLTSALSNKTVDEVWRDILQSKKNEEKKSQDRQPTLGEMTLEDFLVKAGVVAEVSSDRKKTGPVVGFDSNVAALPLQFPQQGQWIQYPQTQYQHSQQSLLGIYMPGQSIAQPLHIGLGVALDIPLVDCQVAVPSPLMGTLSDTQTPGRKRGTPEDMIEKTVERRQKRMIKNRESAARSRARKQAYTHELENKVAHLEEENERLRKQKELENMLTCAPPPEPKYQLRRTSSASF	324

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa02g2449	324	FunFam	ABSCISIC ACID-INSENSITIVE 5-like protein 2	252	304	-	-
	Bisa02g2449	324	SUPERFAMILY	Leucine zipper domain	254	299	IPR046347	GO:0003700\|GO:0006355
	Bisa02g2449	324	Gene3D	-	252	306	-	-
	Bisa02g2449	324	PANTHER	CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED	26	322	IPR043452	GO:0003700\|GO:0045893
	Bisa02g2449	324	Coils	Coil	270	304	-	-
	Bisa02g2449	324	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	252	297	IPR004827	GO:0003700\|GO:0006355
	Bisa02g2449	324	ProSitePatterns	Basic-leucine zipper (bZIP) domain signature.	257	272	IPR004827	GO:0003700\|GO:0006355
	Bisa02g2449	324	MobiDBLite	consensus disorder prediction	302	324	-	-
	Bisa02g2449	324	MobiDBLite	consensus disorder prediction	228	247	-	-
	Bisa02g2449	324	Pfam	bZIP transcription factor	254	298	IPR004827	GO:0003700\|GO:0006355
	Bisa02g2449	324	SMART	brlzneu	250	306	IPR004827	GO:0003700\|GO:0006355
	Bisa02g2449	324	MobiDBLite	consensus disorder prediction	1	23	-	-
	Bisa02g2449	324	CDD	bZIP_plant_BZIP46	254	308	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa02g2449	Bisa-ChrBisa02	61170819	61173708	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa02g2449	26	324	bZIP Transcription Factor Family	AT3G56850	57.616	2.97e-98	290

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Bisa02g2449		bZIP_1	6.4e-14	CL0018