Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2431 ATGGCTTCACTCCTCTTTCCCTATCCAACCCTCTCTTCTCATTTTCCCTCTTCCAAATATGACTTTATGGTTTCTTCCTTCTTAGAATCACGCACTCCTAACCCTAAATTCAACAAATACAGTTCTTCAATCCTTTATTCACCTCAAAATCTCTGCATTCATAGACTCTCTGCTTTCAGAAATTCGAATTCTCCAGGCTTTGTTACAATGGCTTCTGTCGACAGAGAGCCCATGGTTCCCCCTTACCACGTTTTGATTACTGGTTCAAGCAAAGGAATAGGCTATGCCTTGGCAAAAGAGTTTCTAAGAGCTGGTGATCATGTCATAATTTCCTCAAGATCAAATGAAAGGGTAGAGTCTGCTGTCCAGAGCCTGAGAGAAGAATTTGGGGAGCAGTATGTGTGGGGCACTAAATGTGATGTGAGAGAAGGAGAGGATGTGAAGGATTTAGTTGCATTTGCTCAAGAGAAACTGAAATACATTGATATATGGATTAATAATGCAGGATCAAATGCATATAGCTACAAGCCTCTTGCTGAGGCTTTAGATGAAGATCTTATTGAGGTGGTTACAACAAATACGCTTGGTTTGATGATATGTTGTCGAGAGGCAATAAAGATGATGGTGAACCAGCGTCGTGGAGGTCATATTTTCAATATTGATGGAGCAGGTTCAGATGGAAGACCAACTCCCAGGTTTGCTGCCTATGGAGCAACAAAGCGAAGTGTGGTGCATTTAACAAAATCTTTACAGGCAGAATTGCAGATGCAGGATGTAAAAAATGTTGTGGTCCATAATCTTTCGCCAGGGATGGTTACAACTGATCTTCTCATGTCTGGTGCTACAACTAAGCAGGCAAAGTTTTTCATCAATGTGTTGGCTGAACCAGCTGAAGTTGTTGCAGAATACCTAGTTCCAAACATTAGATCTATCCTGGCCAATGGATCAATGAAGCCAACTTACATTAGATACCTCACGGGGGTGAAAGCCTATTCCCAGATATTTTCACGATTAGCATTCGGGGCAAGAAGGAATAGGTACATGATAGAAGATTGA 1056 0.4148 MASLLFPYPTLSSHFPSSKYDFMVSSFLESRTPNPKFNKYSSSILYSPQNLCIHRLSAFRNSNSPGFVTMASVDREPMVPPYHVLITGSSKGIGYALAKEFLRAGDHVIISSRSNERVESAVQSLREEFGEQYVWGTKCDVREGEDVKDLVAFAQEKLKYIDIWINNAGSNAYSYKPLAEALDEDLIEVVTTNTLGLMICCREAIKMMVNQRRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHLTKSLQAELQMQDVKNVVVHNLSPGMVTTDLLMSGATTKQAKFFINVLAEPAEVVAEYLVPNIRSILANGSMKPTYIRYLTGVKAYSQIFSRLAFGARRNRYMIED 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2431 351 FunFam Chlorophyll(Ide) b reductase NOL, chloroplastic 79 325 - -
Bisa02g2431 351 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 223 251 IPR020904 GO:0016491
Bisa02g2431 351 PRINTS Glucose/ribitol dehydrogenase family signature 236 255 IPR002347 -
Bisa02g2431 351 PRINTS Glucose/ribitol dehydrogenase family signature 83 100 IPR002347 -
Bisa02g2431 351 PRINTS Glucose/ribitol dehydrogenase family signature 260 277 IPR002347 -
Bisa02g2431 351 PRINTS Glucose/ribitol dehydrogenase family signature 209 225 IPR002347 -
Bisa02g2431 351 PRINTS Glucose/ribitol dehydrogenase family signature 159 170 IPR002347 -
Bisa02g2431 351 Gene3D - 81 309 - -
Bisa02g2431 351 PANTHER NON-SPECIFIC LIPID TRANSFER PROTEIN-RELATED 65 348 - -
Bisa02g2431 351 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 236 255 IPR002347 -
Bisa02g2431 351 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 170 IPR002347 -
Bisa02g2431 351 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 215 223 IPR002347 -
Bisa02g2431 351 Pfam short chain dehydrogenase 83 279 IPR002347 -
Bisa02g2431 351 CDD SDR_c 84 305 - -
Bisa02g2431 351 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 83 302 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2431 Bisa-ChrBisa02 60656083 60670867 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2431 84 276 Acyl Lipid Metabolism Gene Families AT1G24360 29.798 7.59e-17 78.6