Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2423 ATGCCCAAAAAGCAGACTGATTCCAATTGGATAGTGCTGATCGGTTTCTCTTTGCCTCTCTGCCGCCTTAGCTTAGATTCCGCTCCAATGGCTTCAGAGAAGAAAATGTCGAACCCAATGAGGGAAATCAAGGTTCAGAAGCTCGTTCTGAACATCTCAGTCGGTGAGAGTGGAGATCGTCTCACTCGAGCTGCCAAGGTGCTGGAGCAACTTAGTGGCCAAACCCCTGTATTCTCCAAAGCAAGATATACTGTTCGTTCCTTTGGGATTAGAAGAAATGAAAAAATTGCATGTTATGTCACTGTTAGAGGTGACAAGGCAATGCAGCTTTTGGAGAGTGGTTTGAAGGTGAAGGAATATGAACTTCTGAGAAGAAACTTCAGCGATACTGGCTGCTTTGGTTTCGGTATTCAGGAGCATATTGATTTGGGAATCAAGTATGATCCTTCAACTGGCATTTACGGTATGGACTTCTTTGTTGTTCTGGAACGCCCTGGTTATCGTGTTGGACGTCGTCGTAGGTGCAAGTCTCGTGTTGGAATACAGCACCGCGTCACAAAGGAGGATGCCATGAAGTGGTTTCAGGTGAAATATGAAGGTGTCATCCTTAACAAATCCCAAGCAATCGTTTAG 633 0.4518 MPKKQTDSNWIVLIGFSLPLCRLSLDSAPMASEKKMSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAIV 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2423 210 SUPERFAMILY RL5-like 37 202 IPR022803 -
Bisa02g2423 210 Gene3D - 30 206 IPR022803 -
Bisa02g2423 210 FunFam 60S ribosomal protein L11 30 203 - -
Bisa02g2423 210 PIRSF RPL5p_RPL5a_RPL11e_RPL5o 23 201 IPR002132 GO:0003735|GO:0005840|GO:0006412
Bisa02g2423 210 ProSitePatterns Ribosomal protein L5 signature. 68 84 IPR020929 GO:0003735|GO:0005840|GO:0006412
Bisa02g2423 210 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 31 205 IPR002132 GO:0003735|GO:0005840|GO:0006412
Bisa02g2423 210 Pfam Ribosomal protein L5 38 91 IPR031310 -
Bisa02g2423 210 Pfam ribosomal L5P family C-terminus 95 193 IPR031309 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2423 Bisa-ChrBisa02 60412969 60417004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2423 30 210 Cytoplasmic Ribosomal Protein Gene Family AT5G45775 94.475 3.57e-128 357