Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2406 ATGGACAAAATCCAGGATAAGGAAGGTGAACATAGTAAACTTCAGGGTTCCTCGTCTTCGGCTGTTGCTGTAGCCATCAAGGGTAACAAGAAAAGCAAATATGTATTACAGTGGGCACTTAAGAAGTTTGTTCCTGAGGGAAGGATTGTATTCAAGCTGATACACGTTCACGCTGGTATAAAAGGAGTTCCAACACCAATGGGAAATGTCCCCATCTCACAAGTGCGTCGTGATGTAGCTGATGCTTTCAAAAAGGAAGCGGAGTGGCAGAGAAGTCAAATGCTTTTACCTTATAAGAAAATGTGTGAACAGAGAAAGGTGCATGTGGATGTTGTGATGATCGAATCTGAGGATGTGGCAGCTGCCATAGCAGAAGAAGTTGCCAAGGGTACTGTAACCAAACTCGTTATCGGAGCATCATCTCGTAGCATATTTTCTAGCAAGCTTAGGGGTATGTCTGCAAAGATATCAGCTTGCACTCCAAGATTTTGTACTGTTTATGCTATTTCCAAAGGAAAATTATCTTCTGTACGGCCATCAGACATACAGATTGATGAGAGCTTTATAGATGACAGTCACAGTAGCGAAAACAGTTGTTCCACCACCAGCTCATCATACTACACTTCCTCCTCTCAGACAGACTCTGGTTCAATTGCTTCGTATGATCCTGTAAATTCTTCTTCTTTAGCAGCGCAGCGATTTCAAGCTCTTTCAGCCATTAACCAGACTGTCCTAAGCACAAAACCTAGTTTTGCTCAGTCTAAACATTCTAGATGTCAGTCTCTAGATCATGTGACAGAGATTAATGGTACAAGTCCATCTGCCAGAGATTCTAGCATTGCCAATAGTCTGAGTCGGACTCCCAGTTGCAGAAGCGTTAAATCAGATACTGAATCTTGGATTAATGATCAAAGTTCACCCATGTATGTGTCACCAGCAACTGAATTTCCTTCATCTGATAGGCAGGCAAATATAAATCTTGAGCTGGAAAAGTTGAGGATTGAACTAAGACATGCCCAAGGATTACATGCAATAGCTGAGAGTGAGAACATTGATGCATCACGGAAGCTGAGCAATCTAAATAAGAGACGATCAGAGGAGTTAATGAAACTCAAGGAGATTATTGTTAAGGAAGAGTTGGCAGAAGAATCAGTAAGGAAAGCGAGAGAGAAACACGAAGCTGCAAAAAGAGAAGCTGATTATTTGAAAGAATGTGCTGAAAGAGAAGCTGCAGACAGAAGAGAAACGGACATGAAAGTTGTTCGTGCTGTGAAAGATAACGAAAAGCTAGAGTCTGCTCTCAGTAGTTCCATGCCCCAGTACCATAAGTTTACATGGGATGAAATAGTGTCCGCTACCTCTTCTTTCTCTGAAGACTTGAGAATTGGAAAGGGAGCATACGGTACAGTGTACAAGTGTAATTTGCATCATACTGTTGCTGCTGTTAAAGTACTCCACTCTAAAGGTGGCCACAAAAGCAAGCAATTCCAGCAGGAGCTTGAAATCTTGTGCAGAATTCGTCATCCGAATTTACTGCTCCTTCTTGGTGCATGTCCTGATAACGGATGCCTTGTGTATGAATATATGGAGAATGGTAGCTTGGAGGATAGGTTATTCCGTAAAAACAGTAACACCCCAATTCCTTGGTTTGAGAGGTACCGAATTGCATGGGAAGTGGCCTCAGCTCTTGCCTTTCTTCACAGCTCCAAGCCAACACCTGTCATCCATCGTGATTTAAAACCGGCAAACATTTTGCTTGACAGTAACTTAGTGAGCAAGATTGGTGATATCGGCCTTTCTACAATGCTAGATACAGATGCTTTGTCTACTACTTACAAGGACACAGAGCCGGTCGGGACACTCTGCTATATAGATCCTGAGTATCAAAGGACTGGGTTAATATCTCCGAAATCAGATGTTTATGCTTTTGGAATGGTGATCTTACAGTTATTGACAGCAAAGCCAGCTATAGCACTTACTCATCAGGTAGAAACAGCAATTGATAATGGGAATTTACTAGACATTTTGGATCCAGAAGCAGGGAATTGGCCACTTCAGGAGACACTAGACTTGGCCCGATTAGGCCTGAGCTGTGCTGAACTCCGGCGTAGAGACCGGCCCGATTTAGAATACCATGTGCTTCCTGCACTGGAAAAATTGAAAGAAGTTGCTGATAGAACCCGAGGTTCTAGTTCAAGTGTTAAAGTTAGACCTCCTAATCATTTCATCTGCCCAATACTTCAGGATGTGATGGATGATCCTTGTGTTGCGGCAGATGGATATACATACGATCGCAAAGCAATCGAAACATGGTTTCAAGAGAACAATAAATCACCAATGACAAATATGGCGCTGCCTCATAAGAATCTAATCCCTAATTACACAATTTTATCAGCGATTATGGAGTGGAGATCTGGAGGAAAATGA 2427 0.4232 MDKIQDKEGEHSKLQGSSSSAVAVAIKGNKKSKYVLQWALKKFVPEGRIVFKLIHVHAGIKGVPTPMGNVPISQVRRDVADAFKKEAEWQRSQMLLPYKKMCEQRKVHVDVVMIESEDVAAAIAEEVAKGTVTKLVIGASSRSIFSSKLRGMSAKISACTPRFCTVYAISKGKLSSVRPSDIQIDESFIDDSHSSENSCSTTSSSYYTSSSQTDSGSIASYDPVNSSSLAAQRFQALSAINQTVLSTKPSFAQSKHSRCQSLDHVTEINGTSPSARDSSIANSLSRTPSCRSVKSDTESWINDQSSPMYVSPATEFPSSDRQANINLELEKLRIELRHAQGLHAIAESENIDASRKLSNLNKRRSEELMKLKEIIVKEELAEESVRKAREKHEAAKREADYLKECAEREAADRRETDMKVVRAVKDNEKLESALSSSMPQYHKFTWDEIVSATSSFSEDLRIGKGAYGTVYKCNLHHTVAAVKVLHSKGGHKSKQFQQELEILCRIRHPNLLLLLGACPDNGCLVYEYMENGSLEDRLFRKNSNTPIPWFERYRIAWEVASALAFLHSSKPTPVIHRDLKPANILLDSNLVSKIGDIGLSTMLDTDALSTTYKDTEPVGTLCYIDPEYQRTGLISPKSDVYAFGMVILQLLTAKPAIALTHQVETAIDNGNLLDILDPEAGNWPLQETLDLARLGLSCAELRRRDRPDLEYHVLPALEKLKEVADRTRGSSSSVKVRPPNHFICPILQDVMDDPCVAADGYTYDRKAIETWFQENNKSPMTNMALPHKNLIPNYTILSAIMEWRSGGK 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2406 808 Coils Coil 378 398 - -
Bisa02g2406 808 Gene3D HUPs 12 152 IPR014729 -
Bisa02g2406 808 PANTHER OS02G0152300 PROTEIN 22 802 - -
Bisa02g2406 808 ProSiteProfiles U-box domain profile. 737 808 IPR003613 GO:0004842|GO:0016567
Bisa02g2406 808 Pfam U-box domain 739 804 IPR003613 GO:0004842|GO:0016567
Bisa02g2406 808 Gene3D Transferase(Phosphotransferase) domain 1 529 736 - -
Bisa02g2406 808 CDD STKc_IRAK 462 720 - -
Bisa02g2406 808 Gene3D Phosphorylase Kinase; domain 1 425 528 - -
Bisa02g2406 808 SMART serkin_6 456 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g2406 808 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 737 807 IPR013083 -
Bisa02g2406 808 ProSitePatterns Serine/Threonine protein kinases active-site signature. 574 586 IPR008271 GO:0004672|GO:0006468
Bisa02g2406 808 SMART Ubox_2 741 803 IPR003613 GO:0004842|GO:0016567
Bisa02g2406 808 MobiDBLite consensus disorder prediction 267 290 - -
Bisa02g2406 808 SUPERFAMILY Protein kinase-like (PK-like) 436 709 IPR011009 -
Bisa02g2406 808 CDD STK_N 22 172 - -
Bisa02g2406 808 SUPERFAMILY RING/U-box 727 804 - -
Bisa02g2406 808 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 22 151 - -
Bisa02g2406 808 Coils Coil 329 363 - -
Bisa02g2406 808 Pfam Protein kinase domain 459 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g2406 808 ProSitePatterns Protein kinases ATP-binding region signature. 462 483 IPR017441 GO:0005524
Bisa02g2406 808 ProSiteProfiles Protein kinase domain profile. 456 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g2406 808 CDD RING-Ubox_WDSUB1-like 739 793 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2406 Bisa-ChrBisa02 59738076 59747868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2406 1 805 U-box Gene Family AT4G25160 53.819 0.0 858
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Bisa02g2406 Pkinase 8.1e-40 CL0016