Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2400 ATGGTTCAGTTCATGGAGCTAAGTCCGCGTGAATTCGATGACGCTGCCGCTAAAGATATGGAAAGCTGGTACTTGAAAAAGAAGGAACAAGGCAACGTCGACGGCGCACAAAGCACATGTTTGGACAAACATGTTCCGCTGTCTCCACCCACATCTGAACCAATTTGTACCCGAGGAGCTTATGATCATTTAATTGTGGGTCAATTTTATGAAATCGATCATTCCAATCTTCCACCTAAATGCCCAGATCATTTAAAGTTTATTCGGGTTGTCATGGTCAGTGACATGGGAGAGCTTCAGGTGTCACTAAGATACCCAAGCATCCACTCTCTTCGCACGCAGTTCAGCAACGCAAACTTTGGGAAACCAGACAATAAGAAGATGCCTTCACTCGACGAAAAGTATGTGATGGGGTCAGAATTTGCTAGTAACGTGCTTTGCAGGAGAATCCCATCAGAGGAATTTGCTGAAAGAAGGAATTCATGGAACTTCTGGATTGCATCATCTGAAGAAAATGGAAGAGATGAAAGCCCAGCATTATTCACTGATGAGGCAATGGACCTGGTTTCCAAGAAGGGCTCGTGCTGGTCTCAGCTCAAGTTTACGGGGATGATGCAGTGGGGTAAGCGTCGGCCAGTTAGATTCTTAGGCCGGCATGAGAAGAACAAGTTAGAATCTTTATCAGGATCTACGAAGGAAACGGGGGTAGATGGAAGGGAACAAAACGAGAGATCAGAGGAAAGGACTGAGAGAAAGAGAAAGAAAGGTGAAGAAAAAGAGCCTATGAACGAAGGGTCGTGTGAGGTCATGACGACCCGTAAAAGTAAGAGAAATCAAAACGAAAGTAGCAGCGTTCAAAAATCGAAGAAAGCACAGCATGGCAAGCAGAACCAACTCGTAGTAAACAACAAAAAGAAGCGGAAAATTTCAATTGACAGATGGTCTGCCGAGAGGTATAAGTTAGCAGAGGAGAACATGCTAAAGGTAATGAAAGCTAAAGGAGCGGTGTTCGGAAAACCAATATTAAGGCCAGCATTGAGATCAGAGGCTCGAAAGCTGATAGGTGATACAGGTTTACTAGATCATTTGCTAAAGCACATGGCCGGGAAAGTGGCTCCAGGCGGAACTGAGAGATTTCGGCGGCGACACAATGCTGAAGGTGCGATGGAATACTGGCTTGAGAATGCTGATCTGATTAATATTAGACGGGAAGCAGGCGTTCAAGATCCCTATTGGACTCCACCCCCTGGATGGATGCCTGGGGATAACCCTTCACAGGATCCCATTTGTGCTAGAGAACTTAGAGAGATCAAGGAAGAAATGTCTCAATTGAAGCATGATATGCAGCAGCTGGTATCAAAGAAGAAGGAGGAAGAATTGTTTACACTAACCAGAGCTAATTCTTGTTTGTCCAATAATTTGAATTTGGACAACGAAGGTTCTTTGGTTCCAGTGCAGGAGATGTATAAAGAGTTAGTGAATAAGAAGTCTAAAATTGAGGAACAACTGAAGGACATTTCATTAGCTTTGAACGACCTCGAGGAACAGCTGGTGATGTTGAAAGCAAGAGGAGAGGAGCCAACATCTGAATCAGTGACGCCACCAGCGTTACTGTCAGCACCGACAACAGTAGTGGCAAGAGGAACTGGAAGGGAGACAAAAGAGGAGGAGCAGAAACACAAAAAGAAAGAAACAAAATCAGGTGAATTAGAGCGATCGGATGAGGATATACAGAGCAGGACAGGTGCGGAGGACAAGGCAGCAAAAATAGAGAGGCTGAAAAGTGGGTTCCGGATTTGCAAGCCCCAGGGGACGTTTATATGGCCAAAGATGGTTATAGTGTCCCCTCATCATTCTCAGGATGTGGTCCAGCTAGAGGATCGCATTGTGGTCCCAATTACACCATCCTCGGCCTCCTCCTCCACCACCGTCCCTGAACCACCCCTGAAGACTCAACACGTGGCAACCCCCTCCTCCCCTGTCAAGCCACTTGCAGAGAGGCGCCCTGTCAGCACTGCCACTCTAACCCACGTCACCATGTCGTCCTTTTCTCCTTTTCTTTCTCCTCCTCCTCCGTTGGGAACCCCAGCTAATTCCAAAACTGAGAACCCCCCTCTAACCTCTCTCATTAACCTCAATGAAGCCCCTCCCACCCATGACTCTTCTTTTTGTCGGACTCCAACTTACCATTACCAACCACCCCTTGCTGCCGTGAAGCCACATAACGCAATGGAGGCTGCTGAAAAGGAGGGCGTGGAGACTAGGCACTATGAGCTGCAGAAGGAAAAGGAAAAGGAAAAGGAAAAGGAAAAGGAAAAGGAAAACTCGCCGTCCTTGTCCTCCCCTCAGATGTCAGACAGACATGGGTGGTGGCGTCTGGCTTTGGCCAGTGGCTGTGGCCTCGTCTCTGAAGCATCCCAGCATATTATATAA 2433 0.4702 MVQFMELSPREFDDAAAKDMESWYLKKKEQGNVDGAQSTCLDKHVPLSPPTSEPICTRGAYDHLIVGQFYEIDHSNLPPKCPDHLKFIRVVMVSDMGELQVSLRYPSIHSLRTQFSNANFGKPDNKKMPSLDEKYVMGSEFASNVLCRRIPSEEFAERRNSWNFWIASSEENGRDESPALFTDEAMDLVSKKGSCWSQLKFTGMMQWGKRRPVRFLGRHEKNKLESLSGSTKETGVDGREQNERSEERTERKRKKGEEKEPMNEGSCEVMTTRKSKRNQNESSSVQKSKKAQHGKQNQLVVNNKKKRKISIDRWSAERYKLAEENMLKVMKAKGAVFGKPILRPALRSEARKLIGDTGLLDHLLKHMAGKVAPGGTERFRRRHNAEGAMEYWLENADLINIRREAGVQDPYWTPPPGWMPGDNPSQDPICARELREIKEEMSQLKHDMQQLVSKKKEEELFTLTRANSCLSNNLNLDNEGSLVPVQEMYKELVNKKSKIEEQLKDISLALNDLEEQLVMLKARGEEPTSESVTPPALLSAPTTVVARGTGRETKEEEQKHKKKETKSGELERSDEDIQSRTGAEDKAAKIERLKSGFRICKPQGTFIWPKMVIVSPHHSQDVVQLEDRIVVPITPSSASSSTTVPEPPLKTQHVATPSSPVKPLAERRPVSTATLTHVTMSSFSPFLSPPPPLGTPANSKTENPPLTSLINLNEAPPTHDSSFCRTPTYHYQPPLAAVKPHNAMEAAEKEGVETRHYELQKEKEKEKEKEKEKENSPSLSSPQMSDRHGWWRLALASGCGLVSEASQHII 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2400 810 MobiDBLite consensus disorder prediction 635 658 - -
Bisa02g2400 810 Coils Coil 434 454 - -
Bisa02g2400 810 MobiDBLite consensus disorder prediction 635 666 - -
Bisa02g2400 810 MobiDBLite consensus disorder prediction 276 299 - -
Bisa02g2400 810 MobiDBLite consensus disorder prediction 682 703 - -
Bisa02g2400 810 PANTHER PROTEIN DYAD 63 678 IPR044221 GO:0007131|GO:0051177|GO:0051321
Bisa02g2400 810 MobiDBLite consensus disorder prediction 746 786 - -
Bisa02g2400 810 MobiDBLite consensus disorder prediction 218 307 - -
Bisa02g2400 810 Coils Coil 749 776 - -
Bisa02g2400 810 MobiDBLite consensus disorder prediction 549 585 - -
Bisa02g2400 810 MobiDBLite consensus disorder prediction 236 275 - -
Bisa02g2400 810 MobiDBLite consensus disorder prediction 746 776 - -
Bisa02g2400 810 Coils Coil 485 523 - -
Bisa02g2400 810 MobiDBLite consensus disorder prediction 543 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2400 Bisa-ChrBisa02 59302217 59306894 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2400 301 395 PHD Transcription Factor Family AT5G22260 36.000 4.72e-06 48.1