Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2398 ATGGAGGTCAATCTGGGATTAGTTGCTGGCTCTCGCAATAGTAACGAATTCATTATCATCAACCAAGATGGCAATTTTACTAGATCAGAGGAGCAAGAGTTATGCGGGCAAGTATGCCAAATATGTGGAGACCAGATAGGAATAAGTGGAGATGGAGAGGTGTTTGTGGCATGCAACGACTGTGCCTTCCCTGTGTGTAGAAACTGTTATGAGTACGAGAGAAGGGAAGGAAGCCAAGTGTGTCCTCAATGCAAAACCAGATATAAACGTCTCAAGGGAAGTGCTAGAGTTGAGGGAGATGAGGAGGAGGACGACATTGATGACTTGGAGAATGAATTTGATTTTGTTGGAGCAAAAAAAGAGGATATGCAATCGTCTACTTATTCTCAGGTTGATGATATCCCAGAAGAGGATCAGGCTATGGTGCCTTCAAGCATGAGGAATCAGATGATTGCAGTGCAAATGCAAATGCAAGCGAGACCTATGGATCCTTCAAGGGACCTGGCTGCTTATGGCTATGGCAGTGTTGCATGGAAGGAGAGGATGGAGATGTGGAAGCAAAGACAAGGAAGACTTCGTCAAATGAGGGATGAAAATAAAAGTGACGAAGATAAAGATAATTTTGCAGATGACACCGAACTCCCACTAATGGACGAGGGAAGACAGGCATTGTCAAGAAAAACGGCGATTCCATCGAGCCAAATAAACCCATACCGAATAATAATAATAATTCGAGTGGTGATTGTTGGGTTCTTCTTCCATTACCGTGTGACGCACCCTGTGGAGAACGCCTATGCTCTCTGGCTTGTGGCTGTCATATGTGAGCTCTGCTTCACTATCTCATGGATTCTTGATCAGTACGAGAAAGATAAGCAGCCTTCGCAGCTTTGTGGAATTGACATATTTGTGACCACATTGGACCCACTGAAAGAGCCTCCTCTGGTGACTGCAAACACAGTTCTGTCCATTCTTGCACTGGATTACCCTCCTGAGAAGCTCTCATGCTATGTCTCTGATGATGGGGCCGCCATGCTCACATTTGAGGCCTTGTCTGAAACTTGTGAATTTGCAAGGAAATGGGTCCCTTTTTGTAAGAAATTCAACATTGAGCCGAGGGCTCCAGAATGGTACTTTGCTGAGAAGATCAATTACCTCACAGACAAGGTGCACCCAACGTTTGTGAAAGAGAGAAGAGCTATGAAGAGGGAGTACGGAGAGTTCAGAGTTCGAATTAATTCTTTGGTTGCGAAGGCACGGAAAGTCCCCGATGAGGGATGGACAATGCAGGATGGAACGGCATGGCCTGGAGATAATGTTCGTGACCACCCCGGGATGATTCAGGTTTTTCTTGGCCAATATGGGGGACATGACATGGATGGAAACGAACTGCCACGCTTGGTATATGTTTCTAGAGAAAAGAGACCTAATTTTAAACACCATAAGAAAGCTGGAGCACTGAATGCCTTGGTTAGGGTTTCTGGTGTGCTCTCAAATGCACCTTACCTATTGAACTTGGACTATGACCATTACATCAATAACAGCAAAGCTATTAGAGAAGCAATGTGTTTCATGATGGACCCCTTACAAGGCCAAAGGGTATGCTATGTTCAGTTCTCTCAGAGATTTGATGCTGTTGACAAAAGTGACAAATATGGCAATCAAAGTACTGCATTCTTTGATATTAACATGAAAGGGTTGGATGGGATCCAAGGGCCTATATATGTCGGGACAGGATGCGTCTTCAAGAGGCAGACACTGTATGGTTTTGATGCTCCAAGAAAGAAGAAGACACCAAACAGGACATGCAATTGCTGGCCAAATTGGTGTTGCTGTAAGTGTTGTTGCTTAGGGACGAAGAAGAAGAAGACGAAGAAGTCAAAGTTTGACTTGAAGGATAGCAGTCACAGAAGGGTACATGCAGAGGCTTCTGTGACAGAGTGTGCTCTGAAGTGTATTGAACAGGGCACCAAAGAGCAAGTTTTGGTTGGAACGCTAGAGGCAAAGTTGTGGAAGAAATTTGGACAATCTCCTGTATTTATAGCTTCTACTCAACTAGAGGATGGGGAAACTGTTGAAGATGCAAGCCTCGCATCTCTTCTCAAAGAAGCCATCCATGTCATTAGCTGTTGCTATGAGGAGAAGACAGACTGGGGAAAAGAGGTTGGGTGGATCTATGGTTCAACAAGAGAGGACATACTAACAGGGTTCAAGATGCACTGCCATGGATGGAGGTCCATATACTGCATCCCTGAGAGGCCTGCTTTCGGAGCCTGTACTCCAGCCACTCTCTCCGATGGGCTGCTTCGAGTGTTCAGATGGGCACTTGGGTCCACAGAGATAATGCTGAGCAAGCACTGCCCTCTCTGGTATGGCTATGGAGGAGGACTCAACTGCCTCCAACGTCTTGCTTATGCAAATGCTACGCTCTATCCATGGGCCTCCATTCCCTTGGTTGCCTATTGCACTCTTCCTGCTGTTTGCTTGCTCACTGGCAAATTCATTGTTCCTCAGGTGAATAACTTGGCAGGCATGTGGTTCATCTCCCTCTTCATGTCCATCTTTGCCACAAGCATATTAGAGATGAGATGGAGTGGAGTCACAGTGGATGAGTGGTGGAGAAATGAGCAGTTCTGGGTGATAGGAGGGGTTTCATCCCACTTATTTGCTCTCTTCCTGGGCCTCTTCAAGCTAATAACTGGAGTAGAAGCAAGCCTCATTGTAAAATCAAAACCCAGAGTAGAATATCACAATGACACTGACTTCTCTCAATTATTTTCCCTCAACTGGACCACCCTGCTCATCATACCCTCCACACTGCTCATTCTGAACCTCATTGCCATTGTTGCAGGAGTGTCTTATGCTATCAACAGTGGCTTTGAATCCTGGGGTCCTCTGATGGGGAAGTTGTTCTTTGCCTTTTGGGTGATTCTTCATCTTTACCCTTTTCTTAAGGGTATGGTGGGGAGGCAGAATAGGACACCCACCATTGTGATTGTGTGGTCAATCTTGCTTGCTTCTTTCTTCTCTGTTTTGTGGGTAAAGATTGACCCCTTTTTGCCCAAAGATACTGGTCCTGTTCTGGAGGAGTGTGGGTTGGACTGTAACTAG 3108 0.4562 MEVNLGLVAGSRNSNEFIIINQDGNFTRSEEQELCGQVCQICGDQIGISGDGEVFVACNDCAFPVCRNCYEYERREGSQVCPQCKTRYKRLKGSARVEGDEEEDDIDDLENEFDFVGAKKEDMQSSTYSQVDDIPEEDQAMVPSSMRNQMIAVQMQMQARPMDPSRDLAAYGYGSVAWKERMEMWKQRQGRLRQMRDENKSDEDKDNFADDTELPLMDEGRQALSRKTAIPSSQINPYRIIIIIRVVIVGFFFHYRVTHPVENAYALWLVAVICELCFTISWILDQYEKDKQPSQLCGIDIFVTTLDPLKEPPLVTANTVLSILALDYPPEKLSCYVSDDGAAMLTFEALSETCEFARKWVPFCKKFNIEPRAPEWYFAEKINYLTDKVHPTFVKERRAMKREYGEFRVRINSLVAKARKVPDEGWTMQDGTAWPGDNVRDHPGMIQVFLGQYGGHDMDGNELPRLVYVSREKRPNFKHHKKAGALNALVRVSGVLSNAPYLLNLDYDHYINNSKAIREAMCFMMDPLQGQRVCYVQFSQRFDAVDKSDKYGNQSTAFFDINMKGLDGIQGPIYVGTGCVFKRQTLYGFDAPRKKKTPNRTCNCWPNWCCCKCCCLGTKKKKTKKSKFDLKDSSHRRVHAEASVTECALKCIEQGTKEQVLVGTLEAKLWKKFGQSPVFIASTQLEDGETVEDASLASLLKEAIHVISCCYEEKTDWGKEVGWIYGSTREDILTGFKMHCHGWRSIYCIPERPAFGACTPATLSDGLLRVFRWALGSTEIMLSKHCPLWYGYGGGLNCLQRLAYANATLYPWASIPLVAYCTLPAVCLLTGKFIVPQVNNLAGMWFISLFMSIFATSILEMRWSGVTVDEWWRNEQFWVIGGVSSHLFALFLGLFKLITGVEASLIVKSKPRVEYHNDTDFSQLFSLNWTTLLIIPSTLLILNLIAIVAGVSYAINSGFESWGPLMGKLFFAFWVILHLYPFLKGMVGRQNRTPTIVIVWSILLASFFSVLWVKIDPFLPKDTGPVLEECGLDCN 1035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2398 1035 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 21 112 IPR013083 -
Bisa02g2398 1035 MobiDBLite consensus disorder prediction 189 213 - -
Bisa02g2398 1035 Pfam Cellulose synthase 299 1026 IPR005150 GO:0016020|GO:0016760|GO:0030244
Bisa02g2398 1035 CDD mRING-HC-C4C4_CesA 37 87 - -
Bisa02g2398 1035 SUPERFAMILY RING/U-box 28 107 - -
Bisa02g2398 1035 Coils Coil 92 112 - -
Bisa02g2398 1035 FunFam Cellulose synthase 21 112 - -
Bisa02g2398 1035 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 455 595 IPR029044 -
Bisa02g2398 1035 ProSiteProfiles Zinc finger RING-type profile. 39 85 IPR001841 -
Bisa02g2398 1035 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 222 999 - -
Bisa02g2398 1035 Pfam Zinc-binding RING-finger 32 105 IPR027934 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2398 Bisa-ChrBisa02 59253581 59266933 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2398 7 1034 Glycosyltransferase AT5G09870 60.757 0.0 1347