Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2390 ATGGCCGACTGTAAAATTTGTGTTCTTGCAACTTGCTTGGTTCTGTGGGCAGTTTGTGAGGGCACTTTAGGACTCACTCAAGAAGCTGAGGCTTTGCTCATCTGGAAACAAAGTCTCCCCGACCAACCAATTTTGGAGTCATGGGTCTCTCCTCCATCCACCACCAACTCCACTGCAGCCCAAGCACCATGTTCATGGCGTGGAATTAACTGTGATTCCTCAGCCAATGTCATTGAACTAAACTTGAATTATACTGGTCTTCAAGGTACTCTTCAAAAATTCAACTTCTCTGCATTCCCCAACCTTCTTCTTCTTAATCTCAAGTACAACCAGCTCACCGGCACCATACCAGAAACCATAGGGTTGCTCTCAAAACTCCAATTCCTTGACCTTAATAATAACCATTTCAATGGCACCATCCCTCTTTCTCTTGCAAATCTTACTCAACTTTATGAGCTTGATCTTTCAACAAACAATCTGAATGGAAAATTAGATCATCGTTTGTTCCCTGATGGCAGTGATCAACCCAAAACTGGTCTCATTGGGATAAAATATCTCGTAATCCAGAACACCTTGCTTGGTGGTACAATTCCAAATGAAATAGGGAATATAAGAAATTTGACTATTCTGTCACTACAGAACAAGCTTGCATACACAATGGCAGTGACTGAAAAATGTGATGTGTATAGCTTTGGTGTTTTGGCTTTTGAAGTGCTGATGGGAAAGCATCCTGGCTATCTAATTTCTCATATTCAAAATGGTGGTGCTCAAAATGCCAACCTTAAAGAGATTTTAGACCCTCGTTTGTCACCTATGAAGCAACAAAATCCAAAGGAACTGGTTTTCATTGGGAATCTAGCTCTTTCATGTTTACAAACAAACCCTAAGTCTCGACCCACCATGCGAAGCATAGCTGAAATGATTGAAATGGAAACTACTCATTACTCTTGA 951 0.4101 MADCKICVLATCLVLWAVCEGTLGLTQEAEALLIWKQSLPDQPILESWVSPPSTTNSTAAQAPCSWRGINCDSSANVIELNLNYTGLQGTLQKFNFSAFPNLLLLNLKYNQLTGTIPETIGLLSKLQFLDLNNNHFNGTIPLSLANLTQLYELDLSTNNLNGKLDHRLFPDGSDQPKTGLIGIKYLVIQNTLLGGTIPNEIGNIRNLTILSLQNKLAYTMAVTEKCDVYSFGVLAFEVLMGKHPGYLISHIQNGGAQNANLKEILDPRLSPMKQQNPKELVFIGNLALSCLQTNPKSRPTMRSIAEMIEMETTHYS 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2390 316 Pfam Leucine rich repeat 79 136 IPR001611 GO:0005515
Bisa02g2390 316 FunFam Nuclear pore complex protein NUP107 25 170 - -
Bisa02g2390 316 Pfam Leucine rich repeat N-terminal domain 27 72 IPR013210 -
Bisa02g2390 316 Gene3D Ribonuclease Inhibitor 107 171 IPR032675 -
Bisa02g2390 316 Gene3D Transferase(Phosphotransferase) domain 1 200 315 - -
Bisa02g2390 316 PANTHER LEUCINE RICH REPEAT KINASE 2 79 214 - -
Bisa02g2390 316 Pfam Protein tyrosine and serine/threonine kinase 220 307 IPR001245 GO:0004672|GO:0006468
Bisa02g2390 316 SUPERFAMILY Protein kinase-like (PK-like) 219 308 IPR011009 -
Bisa02g2390 316 SUPERFAMILY L domain-like 28 214 - -
Bisa02g2390 316 Gene3D Ribonuclease Inhibitor 24 106 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2390 Bisa-ChrBisa02 59044169 59047154 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2390 101 229 Receptor kinase-like Gene Family AT4G08850 26.357 5.08e-08 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa02g2390 PK_Tyr_Ser-Thr 1.2e-07 CL0016