Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2387 ATGGCCGACTGTAAAATTTGTGTGCTTGCAATTCCAACTACTTGCTTGGTTTTGTGGGCAGTTTGTGAGGGCACTTTAGGACTCACTCAAGAAGCTGAGGCTTTGCTCATTTGGAAACACAGTCTCCCCTATCAACCAATTTTGGAGTCATGGGTGCCTTCACTATCCACCACCAACTCCACTGCAGCTCAAGCCCCATGTTCATGGCATGGAATTAAGTGTGATTCCTCAGGCAACGTCATTAAAATAAACTTGAATAGTACTCGTCTTCAAGGTACCCTTCAAAAATTCAACTTCTCTGCATTCCCCAACCTTCTTCTTCTTAATCTCAAATTTAACGAGCTCACCGGCACCATACCGGAAACCATAGGGTTGCTCTCAAAACCCCAATTCCTTGACCTTAATCGTAACCATTTCAATGGCACCATCCCCCTTTCTCTTGCAAATCTTACTCAACTTTATGAGCTTGATCTTTCAGACAACCATCTCACCGGAATATTAGACCCTCGTATGTTCCCTGATGGCAGTGATCAACCCAAAACTGGCCTCATTAAGATAAAATATCTCCTAATCCAGTACACCTCGCTTGGTGGTATGATTCCAAATGAAATAGGGAATATAAGAAATTTGACTGGCTTGGCACTAGATGGGAATAACTTCTATGGGCCTATTCCTACATCCCTAGGTAATTGTACACACCTAAGAGTTCTTTTTCTGTCTGAAAACCATCTCTCAGGCATAATTCCCCCCAGTTTTGGTAGATTGACCAATTTAACTGATATTCGCCTCCATTTCAACAATTTACATGGTGAAGTTCCACAAGAATTTGGAAATATTTCTTCTTTAACTGTCCTTCTTCTTTCTGGCAACAACTTCACTGGGCACTTACCACCACAAGTTTGCAAAGCCGGTAAGCTTCTCAATTTCACTGCTTACAACAATAGTTTCTCAGGTGGCACTATTCCTACTGAGATGTTTCAGTTGAAACAACTTCAAAAGCTTGTCTTGTCCTCGAATCGAATATCAGGGGAGATTCCTCCACAGATTGGAAATTCCTCGAGTTTGCTAAGGGGTTCTATCCCGTATCAAATAGGGGACTGCTACAACTTGTTCAGTTTAAATTTGAGCAACAATGACCTCAATGGCACCATCCCATATCAAACAGGAAACATTGACACATTGCTAGATTTTCTAGACTTGAGTTACAATTCACTTTCAGGAGAAATTCCAGCAGATCTTAGTAAGCTCAACAATTTGATTAGCCTGAATATCTCTCACAATAATCTATCCGGTTCCATCCCTAATTCCCTAGGTAGAATGTTGAGCTTGTCAAGCATCAACCTCTCTTACAACAACTTGGAGGGTCCTATACCTAATTGTGGCATATTTAATTCTTCTAATGCACTGGATTTGAGTAATAACAAAAATCTATGTGGGAGGATACAAGGATTGCAACCTTGCAACGTGTCACTTGTACAACTTGATGGTGAAGGTAACAAAAGGAATGTTATGATAGCCATTATTGCTTCTTTGGGTGTAATCTTTCTAATCTTGGTGTTAGGTGGTATTTTTATCATTAGTTGCTGTAAGAGAAACTCAGGAGTTTCAAAACAGAATTCTGCAACCAACATGGAAAGTCCATTTTCAATATGGCATTTCAATGGTAGAGTTGTGTACGAAGACATAATAGAAGCAACAAAGAACTTCGATGACAAGTGCTGCCTAGGGCAGGGAGCTTTCGGAAAAGTTTTCAAAGCAATAATGCCAAGCGAGCTTGCATACACAATGGCAGTGACTGAAAAATGTGATGTGTATAGCTTTGGTGTTTTGGCCTTTGAAGTGTTGATGGGAAAACATGCTGGCAATCTAATTTCTCAGATACAAAATGGTGGTGCTCAAAAAATCAACCTTAAAGAGATTTTAGACCCTCGTTTGTCACCTACGAATATACAGAATCCAAAAGAACTGGCTTTGATTGGGAATCTAGCTCTTTCATGTTTACAAACAAATTCTCAGTCTCGACCCACCATGCGAAGCATAGCTGAAATGATTGAGATGGAGACTACTCATTACTCTTGA 2079 0.4031 MADCKICVLAIPTTCLVLWAVCEGTLGLTQEAEALLIWKHSLPYQPILESWVPSLSTTNSTAAQAPCSWHGIKCDSSGNVIKINLNSTRLQGTLQKFNFSAFPNLLLLNLKFNELTGTIPETIGLLSKPQFLDLNRNHFNGTIPLSLANLTQLYELDLSDNHLTGILDPRMFPDGSDQPKTGLIKIKYLLIQYTSLGGMIPNEIGNIRNLTGLALDGNNFYGPIPTSLGNCTHLRVLFLSENHLSGIIPPSFGRLTNLTDIRLHFNNLHGEVPQEFGNISSLTVLLLSGNNFTGHLPPQVCKAGKLLNFTAYNNSFSGGTIPTEMFQLKQLQKLVLSSNRISGEIPPQIGNSSSLLRGSIPYQIGDCYNLFSLNLSNNDLNGTIPYQTGNIDTLLDFLDLSYNSLSGEIPADLSKLNNLISLNISHNNLSGSIPNSLGRMLSLSSINLSYNNLEGPIPNCGIFNSSNALDLSNNKNLCGRIQGLQPCNVSLVQLDGEGNKRNVMIAIIASLGVIFLILVLGGIFIISCCKRNSGVSKQNSATNMESPFSIWHFNGRVVYEDIIEATKNFDDKCCLGQGAFGKVFKAIMPSELAYTMAVTEKCDVYSFGVLAFEVLMGKHAGNLISQIQNGGAQKINLKEILDPRLSPTNIQNPKELALIGNLALSCLQTNSQSRPTMRSIAEMIEMETTHYS 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2387 692 SMART LRR_typ_2 102 126 IPR003591 -
Bisa02g2387 692 SMART LRR_typ_2 416 440 IPR003591 -
Bisa02g2387 692 SMART LRR_typ_2 279 303 IPR003591 -
Bisa02g2387 692 SMART LRR_typ_2 231 254 IPR003591 -
Bisa02g2387 692 SMART LRR_typ_2 328 352 IPR003591 -
Bisa02g2387 692 SMART LRR_typ_2 150 174 IPR003591 -
Bisa02g2387 692 SMART LRR_typ_2 255 278 IPR003591 -
Bisa02g2387 692 Pfam Leucine rich repeat 233 292 IPR001611 GO:0005515
Bisa02g2387 692 PANTHER LEUCINE RICH REPEAT KINASE 2 185 590 - -
Bisa02g2387 692 Gene3D Ribonuclease Inhibitor 173 490 IPR032675 -
Bisa02g2387 692 PRINTS Leucine-rich repeat signature 416 429 - -
Bisa02g2387 692 PRINTS Leucine-rich repeat signature 153 166 - -
Bisa02g2387 692 Gene3D Transferase(Phosphotransferase) domain 1 577 691 - -
Bisa02g2387 692 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 361 487 - -
Bisa02g2387 692 Pfam Protein tyrosine and serine/threonine kinase 588 683 IPR001245 GO:0004672|GO:0006468
Bisa02g2387 692 FunFam Nuclear pore complex protein NUP107 28 172 - -
Bisa02g2387 692 Gene3D Ribonuclease Inhibitor 112 172 IPR032675 -
Bisa02g2387 692 SUPERFAMILY L domain-like 99 502 - -
Bisa02g2387 692 Pfam Leucine rich repeat N-terminal domain 30 75 IPR013210 -
Bisa02g2387 692 Gene3D Ribonuclease Inhibitor 27 111 IPR032675 -
Bisa02g2387 692 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 178 356 - -
Bisa02g2387 692 Pfam Leucine Rich Repeat 418 438 IPR001611 GO:0005515
Bisa02g2387 692 SUPERFAMILY Protein kinase-like (PK-like) 588 684 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2387 Bisa-ChrBisa02 58850543 58853535 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2387 59 603 Receptor kinase-like Gene Family AT4G08850 34.359 8.03e-84 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa02g2387 PK_Tyr_Ser-Thr 4.3e-06 CL0016