Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2385 ATGGTGGGCGAAGTAACCACACCATATTCTCAAGTATCAACAATGGCCGACTGTAAAATTTGTGTGCTTGCAATTCCAACTACTTGCTTGGTTTTGTGGGCAGTTTGTGAGGATGCTTTAGGACTAACTCAAGAAGCTGAGGCTTTGCTCATCTGGAAACAAAGTCTTCCCGACCAACCAATTTTGGAGTCATGGGTCTCTTCTTCATCCACCACCAATTCCACTACAGCTCAAGCCCCATGTTCATGGCGTGGAATTAACTGTGATTCCTCAGCCAATGTCATTGAACTAAACTTGAATTATACTGGTCTTCAAGGTACTCTTCAAAAATTCAACTTCTCTGCATTCCCCAACCTTCTTCTTCTTAATCTCAAATTCAACCAGCTCACCGGCACCATACCGGAAACTATAGGATTGCTCTCAAAACTCCAATTCCTTGATCTTAATAATAACCATTTCAATGGCACCATCCCTCTTTCTCTTGCAAATCTTACTCAACTTTATGAGCTTGATCTTTCAAAAAATGATCTGACCGGAATATTAGACCATCGTTTGTTCCCTGATGGTAGTGATCAACCCAAAATTGGTTTCATTGGGATAAAATATCTCCTAATCCAAAACACCTTGCTTGGTGGTGGCTCTATTCCTAGTGAGATCTTTCAGTTGAAACAACTTCAAATGCTTGACTTATCCTCAAATCGAATATCGGGCGAGATTCCTCCACAGATTGGGAATTCCTCCAGTTTCTACCATCTTCATTTGAATGGCAACAATCTTTCAGAGCTTGCATACACAATGGCAGTGACTGAAAAATGTGATGTGTATAGCTTTGGTGTTTTGGCTTTTGAAGTGCTGATGGGAAAGCATCCTGGCAATCTAATTTCTCATATACAAAATGGTGGTGCTCAAAAAATCAACCTTAAAGAGATTTTAGACCCTCGTTTGTCACCTACAAAGCAACAGAATCCAAAGGAACTGGCTTTGATTGGGAATCTAGCTCTTTCATGTTTACAAACAAACTCTCGGTCTCGACCCACCATGCGAAGCATAGCTGAAATGATTGAAATGGAGACTACTCATTGA 1083 0.4072 MVGEVTTPYSQVSTMADCKICVLAIPTTCLVLWAVCEDALGLTQEAEALLIWKQSLPDQPILESWVSSSSTTNSTTAQAPCSWRGINCDSSANVIELNLNYTGLQGTLQKFNFSAFPNLLLLNLKFNQLTGTIPETIGLLSKLQFLDLNNNHFNGTIPLSLANLTQLYELDLSKNDLTGILDHRLFPDGSDQPKIGFIGIKYLLIQNTLLGGGSIPSEIFQLKQLQMLDLSSNRISGEIPPQIGNSSSFYHLHLNGNNLSELAYTMAVTEKCDVYSFGVLAFEVLMGKHPGNLISHIQNGGAQKINLKEILDPRLSPTKQQNPKELALIGNLALSCLQTNSRSRPTMRSIAEMIEMETTH 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2385 360 Gene3D Ribonuclease Inhibitor 193 264 IPR032675 -
Bisa02g2385 360 SMART LRR_typ_2 140 163 IPR003591 -
Bisa02g2385 360 SMART LRR_typ_2 222 246 IPR003591 -
Bisa02g2385 360 SMART LRR_typ_2 164 188 IPR003591 -
Bisa02g2385 360 PRINTS Leucine-rich repeat signature 222 235 - -
Bisa02g2385 360 PRINTS Leucine-rich repeat signature 167 180 - -
Bisa02g2385 360 Gene3D Ribonuclease Inhibitor 41 124 IPR032675 -
Bisa02g2385 360 Gene3D Ribonuclease Inhibitor 125 187 IPR032675 -
Bisa02g2385 360 FunFam Nuclear pore complex protein NUP107 42 187 - -
Bisa02g2385 360 Pfam Protein tyrosine and serine/threonine kinase 261 353 IPR001245 GO:0004672|GO:0006468
Bisa02g2385 360 Gene3D Transferase(Phosphotransferase) domain 1 265 357 - -
Bisa02g2385 360 SUPERFAMILY Protein kinase-like (PK-like) 261 354 IPR011009 -
Bisa02g2385 360 PANTHER LEUCINE RICH REPEAT KINASE 2 261 357 - -
Bisa02g2385 360 SUPERFAMILY L domain-like 44 264 - -
Bisa02g2385 360 Pfam Leucine rich repeat N-terminal domain 44 89 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2385 Bisa-ChrBisa02 58700066 58703075 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2385 119 261 Receptor kinase-like Gene Family AT4G08850 35.329 9.74e-16 77.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa02g2385 PK_Tyr_Ser-Thr 6.3e-07 CL0016