Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2378 ATGGCCGACGGTAAAATTTGGGTCTTCTTTGCAAATCTAGCTACTTGCTTGGTTTTGTGTGCACTTTGTGAGGGCACTGTAGGACTCACTCAAGAAGCTGAGGCTTTGCTCATCTGGAAACAAAGTCTACCCTACCAACCAATTTTGGAGTCATGGGTCTCTCCTCCATCCACCACCAACTCCACTACTGCTCAAACCCCATGTTCATGGCGTGGAATTAAGTGTGATTGCTCAAGCAACGTCATTGAACTAAACTTGAATGGTACTGGTCTTCAAGGTACCCTTCAAAAATTCAACTTCTCTGCATTCCCCAACCTTCTTCGCCTTAATCTCAAATTCAACCAGCTCGCCGGCACCATACCGGAAACCATAGGGTTGCTGTCAAAACTCCAATTCCTTGACCTTAAAAATAACCATTTCAATGGCACCATCCCTCTTTCTCTTGCAAATCTTACTCAACTTTATGAGCTTTATCTATCAACAAATGACCTGACGGGAATATTAGACCATCGTTTGTTCCCTGATGGTAGTGATCAACCCAAAACTGGTCTCATTGGGATAAAATATCTCTCAATCCGAAAAACCTTGCTTGGTGGTACAATTCCAAATGAAATAGGAAATATAAGAAATTTGACAGGAGCTTTCGGAAAAGTTTACAAAGCTATAATGCCAGGCGGTGAAGTATATGCTGTCAAAAAGTTAACATGTGAAGCAGACAATATAAAAGCCTTTAAGAGTGAGATAGATGCTTTGACAGAAATACGCCACCGAAACATTGTGAAGCTATATGGATTTTGCTCACACAGTCTGCACACCTTTTTGATTTATGAGTACATGGAAAAAGGGTCTTTAGCTGATGTGCTTAGAGATGATGAGGAAGCATCAAAGTTAGATTTGCCTAAGAGGATACATATTATCAAGGGTGTAGCACATGCTTTGTCTTATATACATCATGATTGTAACCCTCCAATTATTCACAGAGACATATCAAGCAACAATATCTTATTGTCTAACAATCTTGAAGCCCATGTCTCAGACTTCGGCACAGCAAGATTCTTGAAGCCTGATTCATCAATTTGGACATCTTTTGTTGGTACATATGGCTATGCTGCTCCAGAGCTTGCATACACAATGGCAGTGACTGAAAAATGTGATGCATATAGCTTTGGTGTTTTGGCTTTTGAAGTGCTGATGGGAAAGCATCCTGGTGATCTAATTTCTCAGATACAAAATGGTGGTGCCCAAAAAATTAACCTTAAAGAGATTTTAGACCCTCGTTTGTCACCTACGAAGCAACAGAATCCAAAGAAATTGGCTTTGGTTGGGAATCTAGCTCTTTCATGTTTACAAACAAACCCTCAGTCTCGACCAACCATGCGAAACATAGCTCAAATGATTGAAATGGAGACAACTCATTACTCTTGA 1425 0.4042 MADGKIWVFFANLATCLVLCALCEGTVGLTQEAEALLIWKQSLPYQPILESWVSPPSTTNSTTAQTPCSWRGIKCDCSSNVIELNLNGTGLQGTLQKFNFSAFPNLLRLNLKFNQLAGTIPETIGLLSKLQFLDLKNNHFNGTIPLSLANLTQLYELYLSTNDLTGILDHRLFPDGSDQPKTGLIGIKYLSIRKTLLGGTIPNEIGNIRNLTGAFGKVYKAIMPGGEVYAVKKLTCEADNIKAFKSEIDALTEIRHRNIVKLYGFCSHSLHTFLIYEYMEKGSLADVLRDDEEASKLDLPKRIHIIKGVAHALSYIHHDCNPPIIHRDISSNNILLSNNLEAHVSDFGTARFLKPDSSIWTSFVGTYGYAAPELAYTMAVTEKCDAYSFGVLAFEVLMGKHPGDLISQIQNGGAQKINLKEILDPRLSPTKQQNPKKLALVGNLALSCLQTNPQSRPTMRNIAQMIEMETTHYS 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2378 474 SUPERFAMILY L domain-like 61 211 - -
Bisa02g2378 474 SUPERFAMILY Protein kinase-like (PK-like) 212 468 IPR011009 -
Bisa02g2378 474 Gene3D Phosphorylase Kinase; domain 1 207 278 - -
Bisa02g2378 474 Pfam Leucine rich repeat N-terminal domain 31 76 IPR013210 -
Bisa02g2378 474 ProSiteProfiles Protein kinase domain profile. 204 474 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g2378 474 FunFam Nuclear pore complex protein NUP107 29 174 - -
Bisa02g2378 474 ProSitePatterns Tyrosine protein kinases specific active-site signature. 324 336 IPR008266 GO:0004672|GO:0006468
Bisa02g2378 474 Pfam Protein kinase domain 212 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g2378 474 Gene3D Transferase(Phosphotransferase) domain 1 279 473 - -
Bisa02g2378 474 FunFam MDIS1-interacting receptor like kinase 2 279 472 - -
Bisa02g2378 474 Gene3D Ribonuclease Inhibitor 29 204 IPR032675 -
Bisa02g2378 474 PANTHER LEUCINE RICH REPEAT KINASE 2 80 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2378 Bisa-ChrBisa02 58190523 58193521 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2378 212 372 Receptor kinase-like Gene Family AT4G08850 61.310 5.77e-61 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa02g2378 Pkinase 4.9e-48 CL0016