Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2376 ATGGTGGGCGAAGAAACCAAACCATATTCTCATGTCTCAACAATGGCCGGCTGTAAAATTTGTGTGCTTGCAATGCCAACTACTTGCTTGGTTTTGTGGGCAGTTTGTGAGGGCACTTTAGGACTCACTCAAGAAGCTGAGGCTTTGCTCATCTGGAAACAAAGTCTCCCCTACCAACCTATTTTGGACTCATGGGTCTCTCCACCATCCACCACCAACTCCACTGCAGCTCAAGCCCCATGTTCATGGCGTGGAATTAAGTGTGATTCCTCAGGCAACGTTATTGAACTAAACTTGAATCGTACTAGTCTTCAAGGTACCCTTCAAAAATTCAACTTCTTTGCATTCCCCAACCTTCTTCTTCTTAATCTCAAATTCAATGAGCTCACCGGCTCCATACCGAAAACCATAGGGTTGCTCTCAAAACTCCAATTCCTTGACCTTAATCGTAACCATTTCAATGGCACCATCCCTCTTTCTCTTGCAAATCTTACTCAGCTTTATGAGCTTGATCTTTCAGAAAACTATCTCACCGGAATATTAGACCATCGTCTATTCCCTGATGGCAGTGATCAACCCAAAACTGGTCTCGTTGGGATAAAATATCTCCTATTCCAAGACACCTTGCTCGGTGGTACAATTCCAAATGAAATAGGGAATATCATAAATTTGACTATTCTGGCACTAGATGGGAACAGCTTCTATGGGCCTATTCCTACATCACTAGGCAACTGTACACACCTAAGTATTCTTACAATGTCTGAAAACAATCTCTCAGGCATAATTCCCCCCACTTTTGGTAGATTGACCAATTTAACTGATATTCGTCTCCATTACAACAATTTACATGGTGAAGTGCCGCAAGAATTTGGAAACTTTTCTTCTTTAACTATCCTTCTTCTTTCTAGCAACAACTTTACTGGACACTTACCTCCACAAGTTTGCAAAGCTGCAAGATTCTTGAAGCCTGATTCATCAATTTGGACATCTTTTGCTGGGACATATGGCTATGCTGCTCCAGAGCTTGCATACACAATGGCAGTGACTGAAAAATGTGATGTGTATAGCTTTGGTGTTTTTGCTTTTGAAGTACTGATGGGAAAGCATCCTAGTAATCTAATTTCTCAGATACAAAATGGTGGTGCTAAAAAAATAAACCTTAAAGAGATTTTAGACTCTCGTTTGTCACCTACGAAGCAACAAAATTCAAAGGAACTAGCTTTCATTGGGAATCTAGCTCTTTCATGTTTACAAACAAACCCTCAGTCTCGACCAACCATGCGAAACATAGCTCAAATGATGGAGACAACTCATTACTCTTGA 1323 0.4097 MVGEETKPYSHVSTMAGCKICVLAMPTTCLVLWAVCEGTLGLTQEAEALLIWKQSLPYQPILDSWVSPPSTTNSTAAQAPCSWRGIKCDSSGNVIELNLNRTSLQGTLQKFNFFAFPNLLLLNLKFNELTGSIPKTIGLLSKLQFLDLNRNHFNGTIPLSLANLTQLYELDLSENYLTGILDHRLFPDGSDQPKTGLVGIKYLLFQDTLLGGTIPNEIGNIINLTILALDGNSFYGPIPTSLGNCTHLSILTMSENNLSGIIPPTFGRLTNLTDIRLHYNNLHGEVPQEFGNFSSLTILLLSSNNFTGHLPPQVCKAARFLKPDSSIWTSFAGTYGYAAPELAYTMAVTEKCDVYSFGVFAFEVLMGKHPSNLISQIQNGGAKKINLKEILDSRLSPTKQQNSKELAFIGNLALSCLQTNPQSRPTMRNIAQMMETTHYS 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2376 440 FunFam Nuclear pore complex protein NUP107 42 187 - -
Bisa02g2376 440 SUPERFAMILY Protein kinase-like (PK-like) 318 434 IPR011009 -
Bisa02g2376 440 Gene3D Ribonuclease Inhibitor 42 187 IPR032675 -
Bisa02g2376 440 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 241 322 - -
Bisa02g2376 440 Gene3D Ribonuclease Inhibitor 190 318 IPR032675 -
Bisa02g2376 440 Pfam Protein kinase domain 318 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g2376 440 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Bisa02g2376 440 Gene3D Transferase(Phosphotransferase) domain 1 319 439 - -
Bisa02g2376 440 Pfam Leucine rich repeat N-terminal domain 44 89 IPR013210 -
Bisa02g2376 440 Pfam Leucine rich repeat 247 306 IPR001611 GO:0005515
Bisa02g2376 440 PANTHER LEUCINE RICH REPEAT KINASE 2 93 182 - -
Bisa02g2376 440 SMART serkin_6 216 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g2376 440 SUPERFAMILY L domain-like 74 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2376 Bisa-ChrBisa02 57951050 57954072 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2376 73 327 Receptor kinase-like Gene Family AT4G08850 32.308 6.46e-26 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa02g2376 Pkinase 2.4e-12 CL0016