Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2370 ATGGCTTCCAAGCATAGAATAGATGCTTCCCTCGCATGGGTGGTTATGTTGGCGCTTTGCGTAGGCACTTCTGGACAGACGGAAACAGAGGCTTTGCTCAAGTGGAAAGGAAGTCTTCCAGATCAGCCAATTCTGGAGTCATGGGTCTCTCCATCACAGAGCAATTCCACGGCAGCTCAAGCCCCATGTTCATGGCGTGGTTTAAGATGTGACTCTTCAAGCAGCGTCATTGAGATAAACTTGGCTTACACCGGTCTTAAAGGTACCCTTCAAAACTTGAACTTCTCTGCATTTCCAAACCTTGTTCGTCTTGATCTCAAAGTAAACAGTCTCACCGGCAGCATACCACAAAACATTGGGGTGCTCTCAAAACTCCAATTCCTTGACCTCTCTACCAATAATCTCAATGGCACATTACCTCTCTCCCTTGCAAATCTCACTCAAGTTTATGAGCTTGATGTTTCGCGAAACAATATAACCGGGGTATTAGATCCTCGCCTTTTCCCTGATGGCAGCGATCAACCCAAAAGTGGCCTGATTGGGATCAGGAATATTCTTTTTCAAGACACCCTTCTTGGAGGTAGAATTCCTAATGAAATAGGGAATATAAGAAATTTGACGGTGCTAGCTCTAGATGGGAATAACTTCTCTGGGCCTATTCCTTCATCTCTTGGCAACTGTACACATTTAAGCATTCTTAGGATGCCGCAGAATCAACTCTCAGGCATGATTCCCCCAAGTATCGGTAGGTTGACTAATCTGTCTGATGTGCGCTTCCAAATAAACAATTTATATGGTCCTGTGCCTCAAGAATTTGGAAACCTTTCATCCTTAACTGTCTTGCATCTTGCTCAGAACAACTTCACCGGCGAGTTACCACCACAAGTGTGCAAAGGTGGTAAGCTTGTCAATTTAAGTGCTGCCTACAATAGTTTCACTGGCCCGATCCCGGTCAGCCTAAGAAACTGCCCAAGCTTATACAGAGTTCGACTTGAATATAACCAACTGACCGGTTATGCAGATCAAGATTTTGGGGTGTATCCTAATCTTACTTTCCTTGATTTCAGCTACAACAGAGTGCAAGGTGAGCTTTCTTCAAATTGGGGTAGCTGCAAAAACTTGCAATATCTTAATATGGCTGGAAATTCAATAAGCGGCACTATTCATGGTGAGATTTTTCAGTTAGATCAACTAGTAGAGCTTGTTCTATCTTCCAATCAAATATCAGGAGAAATACCTCCACAAGTAGGAAATACGTCCAGCCTGTCCACATTATCTTTGAGTAGCAACAAAATTTTTGGTTTGATACCATCAGGAATTGGAAAGCTTTCCAATTTGCAGTCTTTAGACCTGTCAGCAAACATGCTAAGCGGACCAATCCCTTATGAGATAGGGGATTGCTCCAAATTGGTGAGTTTAAATTTGAGCAACAATAACTTGAATAGCTCGATCCCATCTCAAATTGGAAATCTTGCAGCCTTACAAGATTTTTTGGATTTGAGTTACAATACACTTTCAGAAGAAGTTCCTGCTGATATAGGTAAACTGACAAATTTGATAATCTTGAATATGTCTCACAACAATCTGTCAGGTTCTATCCCAAATTCCCTTGGGGGAATGTGGAGCTTGTCAAGTCTCAACCTCTCCTACAACAATTTGGAGGGTTCTGTACCAAATAACGGCATCTTTAATTCTTCCAATCCAGTGGATTTGAGCAACAACGAAGATTTATGTGGGAATATTCAAGGTTTGCAACCTTGCGGGGTCTCAGTCACAGATAATGGTGGAAGTAAGAAAAAGAAAGTAGTAGTAGCCATTATTGCTTCCCTAGGAGGTGCACTACTCATTTCATTGTTGTTAGCTTGGATTTTTGTTTTTTGCTATAAAAGAAAGACAAGAACTTCGCTGCGGAATTCTGCAGACAACAGAGAAAATTCATTTTCAATATGGTACTTCAACGGCAACATTGTTTATGGAGATATAATTGAAGCAACTAAAAACTTTGATGACAGTCATTGCATTGGGGAGGGAGCATTGGGAAAAGTTTATAGAGCGGAAATATCAGAAGGTCAAGTGTTTGCTATAAAAAAGTTAAGATGTGAGGCAGACAGCTTAGACAATGAGAGCATAAAATCCTTTAAGAGTGAGATAGAAGCCATGACTGAAACACGCCACCGTAACATAGTGAAGCTGTATGGATTTTGCTCGGACGTCTCACACACATTTTTGATTTATCAGTACATGGAAAGAGGGAGCTTAGCTGATATGCTGAGAAATGACAAAAATGCATTAGAGTTAGATTGGTCAACCAGGATTGGAATTGTCAAAGGAGTAGCACAAGCTTTATCATATATGCATCATGATTGTAACCCACCAATAATTCACAGAGACATATCAAGCAAAAATGTTTTATTGTCCACGACTCTCGAAGCTCATGTCTCAGACTTTGGCACTGCAAGGTTTCTGAAGCCAGATTCACGTATTTGGACTTCTTTTGCTGGCACTTATGGCTATGCTGCTCCAGAGCTTGCATACACGATGGCAGTGACTGAGAAATCTGATGTGTTCAGTTTTGGTGTTTTGACTTTTGAGGTTCTCATGGGAAAGCATCCAGCTGATCTAATTTCCAATATGCAAACATTCGGTGTTCAAAATATCAACCTCAAAGAGATTTTAGACCCACGATTGTTACCTCCTACCAAGCAACAAAGTTTAAGGATATTGGCTTTGATTGAGAATCTAGCTCTTTCTTGTTTACAAACAAACCCTGCAGCTCGACCAACCATGCGAAGCATTGCTCAAATGATTGAAATGGAGACTGCTAATGATTCATGA 2835 0.4106 MASKHRIDASLAWVVMLALCVGTSGQTETEALLKWKGSLPDQPILESWVSPSQSNSTAAQAPCSWRGLRCDSSSSVIEINLAYTGLKGTLQNLNFSAFPNLVRLDLKVNSLTGSIPQNIGVLSKLQFLDLSTNNLNGTLPLSLANLTQVYELDVSRNNITGVLDPRLFPDGSDQPKSGLIGIRNILFQDTLLGGRIPNEIGNIRNLTVLALDGNNFSGPIPSSLGNCTHLSILRMPQNQLSGMIPPSIGRLTNLSDVRFQINNLYGPVPQEFGNLSSLTVLHLAQNNFTGELPPQVCKGGKLVNLSAAYNSFTGPIPVSLRNCPSLYRVRLEYNQLTGYADQDFGVYPNLTFLDFSYNRVQGELSSNWGSCKNLQYLNMAGNSISGTIHGEIFQLDQLVELVLSSNQISGEIPPQVGNTSSLSTLSLSSNKIFGLIPSGIGKLSNLQSLDLSANMLSGPIPYEIGDCSKLVSLNLSNNNLNSSIPSQIGNLAALQDFLDLSYNTLSEEVPADIGKLTNLIILNMSHNNLSGSIPNSLGGMWSLSSLNLSYNNLEGSVPNNGIFNSSNPVDLSNNEDLCGNIQGLQPCGVSVTDNGGSKKKKVVVAIIASLGGALLISLLLAWIFVFCYKRKTRTSLRNSADNRENSFSIWYFNGNIVYGDIIEATKNFDDSHCIGEGALGKVYRAEISEGQVFAIKKLRCEADSLDNESIKSFKSEIEAMTETRHRNIVKLYGFCSDVSHTFLIYQYMERGSLADMLRNDKNALELDWSTRIGIVKGVAQALSYMHHDCNPPIIHRDISSKNVLLSTTLEAHVSDFGTARFLKPDSRIWTSFAGTYGYAAPELAYTMAVTEKSDVFSFGVLTFEVLMGKHPADLISNMQTFGVQNINLKEILDPRLLPPTKQQSLRILALIENLALSCLQTNPAARPTMRSIAQMIEMETANDS 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2370 944 Gene3D Transferase(Phosphotransferase) domain 1 748 944 - -
Bisa02g2370 944 Gene3D Phosphorylase Kinase; domain 1 629 747 - -
Bisa02g2370 944 FunFam Nuclear pore complex protein NUP107 25 168 - -
Bisa02g2370 944 Pfam Leucine Rich Repeat 518 539 IPR001611 GO:0005515
Bisa02g2370 944 Pfam Protein kinase domain 670 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g2370 944 PRINTS Leucine-rich repeat signature 125 138 - -
Bisa02g2370 944 PRINTS Leucine-rich repeat signature 443 456 - -
Bisa02g2370 944 SUPERFAMILY Protein kinase-like (PK-like) 645 938 IPR011009 -
Bisa02g2370 944 Pfam Leucine rich repeat N-terminal domain 27 71 IPR013210 -
Bisa02g2370 944 SUPERFAMILY RNI-like 233 560 - -
Bisa02g2370 944 Gene3D Ribonuclease Inhibitor 25 170 IPR032675 -
Bisa02g2370 944 Pfam Leucine rich repeat 421 480 IPR001611 GO:0005515
Bisa02g2370 944 PANTHER LEUCINE RICH REPEAT KINASE 2 188 940 - -
Bisa02g2370 944 ProSitePatterns Tyrosine protein kinases specific active-site signature. 793 805 IPR008266 GO:0004672|GO:0006468
Bisa02g2370 944 Gene3D Ribonuclease Inhibitor 361 460 IPR032675 -
Bisa02g2370 944 SUPERFAMILY RNI-like 73 269 - -
Bisa02g2370 944 Coils Coil 935 944 - -
Bisa02g2370 944 FunFam MDIS1-interacting receptor like kinase 2 748 942 - -
Bisa02g2370 944 FunFam Leucine-rich repeat receptor protein kinase MSP1 630 747 - -
Bisa02g2370 944 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 177 268 - -
Bisa02g2370 944 Gene3D Ribonuclease Inhibitor 461 587 IPR032675 -
Bisa02g2370 944 ProSiteProfiles Protein kinase domain profile. 668 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g2370 944 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 276 591 - -
Bisa02g2370 944 Gene3D Ribonuclease Inhibitor 177 360 IPR032675 -
Bisa02g2370 944 SMART LRR_typ_2 468 491 IPR003591 -
Bisa02g2370 944 SMART LRR_typ_2 122 145 IPR003591 -
Bisa02g2370 944 SMART LRR_typ_2 203 227 IPR003591 -
Bisa02g2370 944 SMART LRR_typ_2 275 299 IPR003591 -
Bisa02g2370 944 SMART LRR_typ_2 395 419 IPR003591 -
Bisa02g2370 944 SMART LRR_typ_2 540 565 IPR003591 -
Bisa02g2370 944 SMART LRR_typ_2 443 467 IPR003591 -
Bisa02g2370 944 SMART LRR_typ_2 146 170 IPR003591 -
Bisa02g2370 944 SMART LRR_typ_2 516 539 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2370 Bisa-ChrBisa02 57689268 57692461 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2370 28 841 Receptor kinase-like Gene Family AT4G08850 40.594 0.0 634
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa02g2370 Pkinase 1.2e-48 CL0016