Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2369 ATGGCCAAGCCAATATTTTGTGTCTTCATTCCAATTCTAGCTGCTTGCTTGGTTTTGTGTGCACTTTCTGAGGGCACTTCAGGACTTACCCAAGAAGCTCAGGCTCTGCTATACTGGAAAAACAGTCTTCCAAACCAACCAATTTTGGAGTCATGGGTCTCTTCACCATCCACCAACGACTCCACTGCAGCTCAAGCCCCATGTTCATGGCGTGGAATTAAGTGTGATTTTTCAGGCAACGTCGTTGAACTAAACTTGAATCGTACTGGTCTTCAAGGTACCCTTCAAAAATTCAACTTCTCTGCATTCCCCAACCTTCTTCTTATTAATCTAAATTTCAACCAACTCACCGGCACCATACCGGAAACCATAGGGTTGCTCTCAAAGCTCCAATTCCTAGACCTCAATAATAATTTTATTAATGGCACTTTACCCCTTTCTTTTGCTAATCTGACTCAACTATATGAGCTTGATCTTTCAGGCAATAATATAACAGGATTACTGGACCCTCGTCTATTCCCTGACGGAACTGATCAACCCAAAACTGGTTTAGTTGCCATCCAAAATCTCCTCTTTATGAACACCCTGCTTGGTGGTAGAATTCCAAATGAAATAGGGAATATAAGAAATTTAACTGTGTTTTCTCTAGATGGGAGTTACTTCCATGGGCCTATACCCCCATCTTTGAGCAATTGCACACTTCTAAGCACTCTTACAATGTCTGCAAACTCTATCTCAGGTGGCACTGTTCCTGGTGAGATCTTTCAGTTGAAACAACTACAAAGCCTTGATCTGTCCTCGAACCAAATATCTGGTGAAATTCCTCCACATATTGGAAATTCCTCTAGCTTGTTCCATCTAAATTTGAGTGTTAACTATCTTTCAGACTTTGGCACATCGAGGTTCTTGAAGCATGATTCTTCAATTTGGACATCATTTGCTGGTACATATGGCTATGCTGCTCCAGAGCTCGCATACACAATGGCAGTGAGTAAGAAATGTGATGTGTATAGCTTTGGTGTTTTGGCTTTTGAGGTTCTGATGGGAAGGCATCCAGGAGACTTGATTTCCAAAATACAAGCATTTGCTATTCAAAATATCAACTTCAAGGAGATTCTAGACCCACGTTTGCCACCACCTTTGCAAGGGAAAATTTTGAAGGACTTGGCTTTGATTAGCAATGAAGCACTTTCATGTTTACAAATAAACCCTCAATGTAGACCAACAATGCGAAGCATAGCTCAAAAGCTGGAAGAATGA 1260 0.4119 MAKPIFCVFIPILAACLVLCALSEGTSGLTQEAQALLYWKNSLPNQPILESWVSSPSTNDSTAAQAPCSWRGIKCDFSGNVVELNLNRTGLQGTLQKFNFSAFPNLLLINLNFNQLTGTIPETIGLLSKLQFLDLNNNFINGTLPLSFANLTQLYELDLSGNNITGLLDPRLFPDGTDQPKTGLVAIQNLLFMNTLLGGRIPNEIGNIRNLTVFSLDGSYFHGPIPPSLSNCTLLSTLTMSANSISGGTVPGEIFQLKQLQSLDLSSNQISGEIPPHIGNSSSLFHLNLSVNYLSDFGTSRFLKHDSSIWTSFAGTYGYAAPELAYTMAVSKKCDVYSFGVLAFEVLMGRHPGDLISKIQAFAIQNINFKEILDPRLPPPLQGKILKDLALISNEALSCLQINPQCRPTMRSIAQKLEE 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2369 419 SUPERFAMILY L domain-like 65 304 - -
Bisa02g2369 419 PANTHER LEUCINE RICH REPEAT KINASE 2 292 418 - -
Bisa02g2369 419 SUPERFAMILY Protein kinase-like (PK-like) 291 415 IPR011009 -
Bisa02g2369 419 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Bisa02g2369 419 Gene3D Transferase(Phosphotransferase) domain 1 279 419 - -
Bisa02g2369 419 SMART LRR_typ_2 127 150 IPR003591 -
Bisa02g2369 419 SMART LRR_typ_2 257 281 IPR003591 -
Bisa02g2369 419 SMART LRR_typ_2 151 175 IPR003591 -
Bisa02g2369 419 Pfam Leucine Rich Repeat 259 280 IPR001611 GO:0005515
Bisa02g2369 419 Pfam Leucine Rich Repeat 129 151 IPR001611 GO:0005515
Bisa02g2369 419 ProSiteProfiles Protein kinase domain profile. 154 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g2369 419 SMART serkin_6 232 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g2369 419 FunFam Nuclear pore complex protein NUP107 29 173 - -
Bisa02g2369 419 Pfam Protein kinase domain 294 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g2369 419 Gene3D Ribonuclease Inhibitor 28 179 IPR032675 -
Bisa02g2369 419 Gene3D Ribonuclease Inhibitor 181 249 IPR032675 -
Bisa02g2369 419 PRINTS Leucine-rich repeat signature 257 270 - -
Bisa02g2369 419 PRINTS Leucine-rich repeat signature 154 167 - -
Bisa02g2369 419 ProSiteProfiles Leucine-rich repeat profile. 283 304 IPR001611 GO:0005515
Bisa02g2369 419 ProSiteProfiles Leucine-rich repeat profile. 259 281 IPR001611 GO:0005515
Bisa02g2369 419 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 202 297 - -
Bisa02g2369 419 Pfam Leucine rich repeat N-terminal domain 31 76 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2369 Bisa-ChrBisa02 57569329 57572320 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2369 294 322 Receptor kinase-like Gene Family AT4G08850 65.517 4.94e-06 47.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa02g2369 Pkinase 4.4e-13 CL0016