Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2361 ATGGCCAAGCCAATATTTTGTGTCTTCATTCCAATTCTAGCTGCTTGCTTGGTTTTGTGTGCACTTTGTGAGGGCACTTCAGGACTTACCCAAGAAGCTCAGGCTCTGCTATACTGGAAAAACAGTCTTCCAAACCAACCAATTTTGGAGTCATGGGTCTCTTCACCATCCACCAACAACTCCACTGCAGCTCAAGCCCCATGTTCATGGCGTGGAATTAAGTGTGATTCTTCAGGCAACGTCGTTGAACTAAACTTGAATCGTACTGGTCTTCAAGGTACTCTTCAAAAATTCAACTTCTCTGCATTCCCCGACCTTCTTCTTCTTAATCTAAATTTCAACCAACTCACCGGCGCCATACCGGAAACCATAGGGTTGCTCTCAAAACTCCAATTCCTAGACCTCAATAATAATTTTATTAATGGCACTTTACCCCTTTCTTTTGCTAATCTGACTCAACTATATGAGCTTGATCTTTCAGGCAATAATATAACAGGATTACTGGACCCTCGTCTATTCCCTGACGGAACTGATCAACCCAAAACTGGTTTAGTTGCCATCCAAAATCTCCTCTTTATGAACACCCTGCTTGGTGGTAGAATTCCAAATGAAATAGGGAATATAAGAAATTTAACTGTGTTTTCTCTAGATGGGAGTTACTTCCATGGGCCTATACCCCCATCTTTGAGCAATTGCACACTTCTAAGCACTCTCACAATGTCTGCAAACTCTCTCTCAGGTGGCACTGTTCCTGGTGAGATCTTTCAGTTGAAACAACTACAAAGCCTTGATCTGTCCTCGAACCAAATATCTGGTGAAATTCCTCCACATATTGGAAATTCCTCTAGCTTGTTCCATCTAAATTTGAGTGTTAACTATCTTTCAGGTATGATACCCAAGGCAATTGGAAAGCTTTCTAGCTTGCAATCTTTAGACTTGTCAACTAATAAGCTAGACTTTGGCACATCGAGGTTCTTGAAGCATGATTCTTCAATTTGGACATCATTTGCTGGTACATATGGCTATGCTGCTCCAGAGCTTGCATACACAATGGCAGTGAGTAAGAAATGTGATGTGTATAGCTTTGGTGTTTTGGCTTTTGAGGTTCTGATGGGAAGGCATCCAGGAGACTTGATTTCCAAAATACAAGCATTTGCTATTCAAAATATCAACTTCAAGGAGATTCTAGACCCACGTTTGCCACCACCTTTGCAAGGAAAGATTTTGAAGGACTTGGCTTTGATTAGCAATGAAGCACTTTCATGTTTACAGATAAACCCTCAATGTAGACCAACAATGCGAGGCATAGCTCAAAAGCTAGAAGACTGA 1329 0.4131 MAKPIFCVFIPILAACLVLCALCEGTSGLTQEAQALLYWKNSLPNQPILESWVSSPSTNNSTAAQAPCSWRGIKCDSSGNVVELNLNRTGLQGTLQKFNFSAFPDLLLLNLNFNQLTGAIPETIGLLSKLQFLDLNNNFINGTLPLSFANLTQLYELDLSGNNITGLLDPRLFPDGTDQPKTGLVAIQNLLFMNTLLGGRIPNEIGNIRNLTVFSLDGSYFHGPIPPSLSNCTLLSTLTMSANSLSGGTVPGEIFQLKQLQSLDLSSNQISGEIPPHIGNSSSLFHLNLSVNYLSGMIPKAIGKLSSLQSLDLSTNKLDFGTSRFLKHDSSIWTSFAGTYGYAAPELAYTMAVSKKCDVYSFGVLAFEVLMGRHPGDLISKIQAFAIQNINFKEILDPRLPPPLQGKILKDLALISNEALSCLQINPQCRPTMRGIAQKLED 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2361 442 PANTHER LEUCINE RICH REPEAT KINASE 2 33 318 - -
Bisa02g2361 442 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Bisa02g2361 442 FunFam Nuclear pore complex protein NUP107 29 173 - -
Bisa02g2361 442 Pfam Leucine rich repeat N-terminal domain 31 76 IPR013210 -
Bisa02g2361 442 Gene3D Transferase(Phosphotransferase) domain 1 317 442 - -
Bisa02g2361 442 Gene3D Ribonuclease Inhibitor 183 316 IPR032675 -
Bisa02g2361 442 Gene3D Ribonuclease Inhibitor 28 176 IPR032675 -
Bisa02g2361 442 PRINTS Leucine-rich repeat signature 260 273 - -
Bisa02g2361 442 PRINTS Leucine-rich repeat signature 305 318 - -
Bisa02g2361 442 SMART serkin_6 232 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g2361 442 Pfam Leucine rich repeat 280 318 IPR001611 GO:0005515
Bisa02g2361 442 Pfam Leucine Rich Repeat 129 151 IPR001611 GO:0005515
Bisa02g2361 442 ProSiteProfiles Leucine-rich repeat profile. 259 281 IPR001611 GO:0005515
Bisa02g2361 442 ProSiteProfiles Protein kinase domain profile. 154 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g2361 442 SUPERFAMILY L domain-like 31 325 - -
Bisa02g2361 442 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 182 274 - -
Bisa02g2361 442 Pfam Protein kinase domain 319 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g2361 442 SUPERFAMILY Protein kinase-like (PK-like) 319 438 IPR011009 -
Bisa02g2361 442 SMART LRR_typ_2 127 150 IPR003591 -
Bisa02g2361 442 SMART LRR_typ_2 257 281 IPR003591 -
Bisa02g2361 442 SMART LRR_typ_2 305 328 IPR003591 -
Bisa02g2361 442 SMART LRR_typ_2 151 175 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2361 Bisa-ChrBisa02 57188941 57191933 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2361 105 319 Receptor kinase-like Gene Family AT4G08850 35.652 5.27e-27 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa02g2361 Pkinase 7.5e-12 CL0016