Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2347 ATGGGTGATTCCGGGGTTCCCCCTGATCAAGCCCCGCACTTTCACCACCCAACCGCCGCCATCATCAAGAGAATTCGACTGGAGAACTTCATGTGCCATAGTAATCTCGAGATGGAGTTCGGAGAGTGGGTGAATTTCATCACTGGTCAAAATGGAAGTGGTAAGAGTGCAATCCTAACTGCATTGTGTGTTGCATTCGGTTGTCGAGCTAAAGGAACTCAAAGAGCAGCGACTCTGAAGGATTTTATAAAAACTGGTTGCAGTTATGCTGTCATCCATGTGGAAATAAAAAATGAAGGAGAGGATGCTTTTAAGCCAGAAATATATGGTAACGTTATCACTGTAGAACGTAGGATATCTGAATCCACAAGCTCCACCGTGTTAAAAGACTACCAAGGAAAGAAGATTGTCAGTCGGAAAGCAGAACTCCAGGAAATGGTGGAGCATTTTAATATTGATGTGGAGAATCCTTGTGTAATTATGAGTCAAGACAAAAGCAGGGAATTTTTGCATTCAGGGAATGACAAAGATAAATTTAAGTTCTTTTACAAGGCCACACTTCTTCAGCAAGTTGATGATCTTCTGGAAAGTGTTTTAAAAGGATTGGAGCATTCATTTGGACTTCTTGGTGGATTAGAGGCTACAATAAGGCCCATAGAGAAGGAGCTTAATGAGCTAAGAGTCAAAATTACAAGTATGGAACATGTTGAACAAATATCTCTGGAGATTCAGCAGTTAAAGAAGAAGCTTGCATGGTCATGGGTTTATGATGTGGATAAGCAACTCCAGGAACAATGTTTAAAGATTGAAAAGCTTAAGGATAGGATACCCACTTGTCAAGCCAAAATTGACGACCAACTGCGCCTCATTGAAGAATTGAAGGAACATTTACATAAGAAGAAAGGTCATATCAGAAACATGTTTGAGAAGACATCTGAAGTGAATCAGAAGAAGCAAAAATTACAACAATCTATATCCTTGGCTACTAAAGAAGTACTTGAAAAAGAACAAGAGTGCAAACGCATAACTAAGAGTATTGAGATAATGGTACAGCATGTTAGGACTCTTGAAGAACAGGTGCAGGATATTCATGAGAAGCATGTGCAAAATACTCAGGCTGAAGAATCTGAGATAGAGAGGAAATTGAAGGGGCTCCAAAATGAGGTCGATTCTGCTGAATTGGCTTTGAGAAGGTTGAGGGAAGAAGTGGCTATACTGGCTGAAAGTGTACAACAACAAAATAATGAAGTCAGAAAGGTTACTGATGAGATTCAAGATCATGAGAGAAAGTATCGTGACATCTGCAATTCCATCCGCGAGCTTAGAAACCACCAAACTAATAAGGTTGCAGCTTTTGGAGGAGATAGAGTGATGAATCTACTACGTATTATTGAGAGATGTAATCGGAGGTTTAAGAGGCCACCTATTGGTCCAATTGGTGCTCATCTGAACCTGGTTAATGGTGATAAATGGGCTGTTGCTGTTGAGCATGCAATTGGGAAGATGCTCAATTCTTTTATTGTGACGGATCATAAGGATTCTCTTCTTCTGAGAGAATGTGCAAGGGAAGCAAATTATAGTCACCTCCAAATCTTTATTTATGATTTTTCAAGACCACGATTGACTATACCACCGCACATGCTTCCCCAAACAACACATCCATCAACTCTTTCCGTTTTACATTCAGTGAATGACACTGTGATTAATGTCTTAGTGGATCTGGGGAACGTTGAGAGACAAATTCTTGTTAGGGATTATGATGCTGGGAAAATGGTTGCTTTTGACCAAAGGGTCTCAAATCTGAAGGAAGTCTTCACCTCTGATGGATATAAAATGTTTTCTCGTGGCTCAGTGCAGACTGTTCTTCCCCCAAATAAGAGGCAGAGAACTGGTCGGCTATGTAGTTCTTTTGACAATCAAATTAATGTTCTTGAAGATGATGCATCCCGTGAACAAGATGCAGCTAATCATTTAAAGAGAAGTAAAAGGGAGGCAGAAGAAAAGCTTGACGATTTGGATAGGAAGCTAAGGCATGTAAAGAGGTTATGTTTAAATGCAGGGAAAGATCTGTCTTCTAAGAAATTAGCATTTGATGATGAAAAGAACCACTATGCTGCAGCAAATCGTTCATCACCTGCATTATCTGCTGATGAGATTCAACAAGAAATTTCAGAAGTTCAGCAGGAGATACAAAGAAAGAAAGATTTCTTGAAGGAGTGTCAGGGTAGGATGCATGAAGCAGCTGCAAAGGCAGATGATCTTAAAGTATCATTTGAAGAACTTTGTGCATCAGCGCAAGATGAGATTGGTGCCCTTGAGAAAGCAGAGAGTGAACTAATGCAGATTGAACGGGACATGCGTTCAGCAGAAGAGGTTTCCTTCCACTATGATCTACTTGAGAAGGCTCATTATGATGGTGTCATGCAACGCAAAGTCCTCCCAGATATCAAGGGGGCAGAGGCACGCTATCTGGAGCTTAAGCAACAGCGGGAGGAATACAACAGAAAGGCTTCTATCATTTGCTGTGAGAATGAACTTCAATCTCTAGGAGGTTCGGATGGAAGCACGCCAGAGCAACTCAGTGCACAGATACAAAGACTAACTCAGAGACTTCAGCGTGAGAGCCAAAGATTCTCAGAATCAATTGATGATCTTAGGATGCTGTATGAGAAAAAAGAACGTAAGATTATGAGAAAGCAGCAAGCTTACAGAGCATATCGAGAGAAGCTAGATGCTTGCCAGAGAGCCTTAGAATTACGAAGGAACAAGTTTCGCAGAAATGCAACTCTTTTGAGGCGCTTGTTATCTTGGAAATTTAATGACCATTTGGGGAAAAAAGGATTCAGTGGACTCATCACAGTCAATTATGAAGAAAAAACCCTTTCAATCAAGGTGCAGATGCCTCAGGATGCATCAGGATGCACCGTTCATGACACTCGAGGGCTTTCAGGTGGGGAGCGTTCTTTTTCAACATTATGCTTTGCACTAGCCCTCCATGATATGACAGAATCGCCTTTCCGAGCAATGGATGAGTTTGATGTATTTATGGATGCTGTCAGTCGAAAGATTAGTTTGGACACTTTAGTGGATTTTGCTGTGGAACAAGGTTCCCAATGGATATTTATTACCCCGCATGATATTAGTATGGTGAAGCAGGGTGACAGGATTAAAAAGCAGCAAATGGCAGCTCCCCGTTCATGA 3201 0.4111 MGDSGVPPDQAPHFHHPTAAIIKRIRLENFMCHSNLEMEFGEWVNFITGQNGSGKSAILTALCVAFGCRAKGTQRAATLKDFIKTGCSYAVIHVEIKNEGEDAFKPEIYGNVITVERRISESTSSTVLKDYQGKKIVSRKAELQEMVEHFNIDVENPCVIMSQDKSREFLHSGNDKDKFKFFYKATLLQQVDDLLESVLKGLEHSFGLLGGLEATIRPIEKELNELRVKITSMEHVEQISLEIQQLKKKLAWSWVYDVDKQLQEQCLKIEKLKDRIPTCQAKIDDQLRLIEELKEHLHKKKGHIRNMFEKTSEVNQKKQKLQQSISLATKEVLEKEQECKRITKSIEIMVQHVRTLEEQVQDIHEKHVQNTQAEESEIERKLKGLQNEVDSAELALRRLREEVAILAESVQQQNNEVRKVTDEIQDHERKYRDICNSIRELRNHQTNKVAAFGGDRVMNLLRIIERCNRRFKRPPIGPIGAHLNLVNGDKWAVAVEHAIGKMLNSFIVTDHKDSLLLRECAREANYSHLQIFIYDFSRPRLTIPPHMLPQTTHPSTLSVLHSVNDTVINVLVDLGNVERQILVRDYDAGKMVAFDQRVSNLKEVFTSDGYKMFSRGSVQTVLPPNKRQRTGRLCSSFDNQINVLEDDASREQDAANHLKRSKREAEEKLDDLDRKLRHVKRLCLNAGKDLSSKKLAFDDEKNHYAAANRSSPALSADEIQQEISEVQQEIQRKKDFLKECQGRMHEAAAKADDLKVSFEELCASAQDEIGALEKAESELMQIERDMRSAEEVSFHYDLLEKAHYDGVMQRKVLPDIKGAEARYLELKQQREEYNRKASIICCENELQSLGGSDGSTPEQLSAQIQRLTQRLQRESQRFSESIDDLRMLYEKKERKIMRKQQAYRAYREKLDACQRALELRRNKFRRNATLLRRLLSWKFNDHLGKKGFSGLITVNYEEKTLSIKVQMPQDASGCTVHDTRGLSGGERSFSTLCFALALHDMTESPFRAMDEFDVFMDAVSRKISLDTLVDFAVEQGSQWIFITPHDISMVKQGDRIKKQQMAAPRS 1066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2347 1066 Gene3D - 21 274 IPR027417 -
Bisa02g2347 1066 Coils Coil 318 338 - -
Bisa02g2347 1066 MobiDBLite consensus disorder prediction 648 667 - -
Bisa02g2347 1066 Coils Coil 816 836 - -
Bisa02g2347 1066 Coils Coil 716 736 - -
Bisa02g2347 1066 SUPERFAMILY Methyl-accepting chemotaxis protein (MCP) signaling domain 277 444 - -
Bisa02g2347 1066 Coils Coil 882 916 - -
Bisa02g2347 1066 Pfam RecF/RecN/SMC N terminal domain 22 1058 IPR003395 -
Bisa02g2347 1066 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 21 1056 IPR027417 -
Bisa02g2347 1066 SUPERFAMILY Smc hinge domain 429 598 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Bisa02g2347 1066 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 18 1065 - -
Bisa02g2347 1066 Coils Coil 368 444 - -
Bisa02g2347 1066 Coils Coil 765 792 - -
Bisa02g2347 1066 Coils Coil 641 682 - -
Bisa02g2347 1066 Gene3D - 815 1062 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2347 Bisa-ChrBisa02 56526141 56586584 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2347 22 1066 Structural Maintenance of Chromosomes family AT5G61460 61.435 0.0 1257