Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2345 ATGAAACCTCCTTCTCTTTTCTTTCTCACATTCTTCTTCTTCTCCTTCTTTTTCTTTCTTTCCCAAACACACCTAGTTTACTCTGCTAAACCTGCAAGAACGTCTCTTCCCTTCCAACTCATCTCTCTGCTTTCTCTTAAATCCTCCCTCATAGACCCTCTCAATACCCTCCATGACTGGGATTACCCCTCTGATCACTCCAACAATTCTCAAGAACCCATTTGGTGTTCATGGTCAGGAGTAATGTGCCACCCACGAGCACCCCACATCACCACCCTTGACCTCTCTAAACGCAACCTCTCTGGCTCAATTTCCCCCCAAATCCGTTACTTGACTACCCTGAACCACTTGAATCTCAGTGGAAATGACTTCAATGGAACTTTCCCACCAGCGATTTTTGAACTCCCTGAGCTCAGGACTCTCGATATCAGCCACAACTTCTTCAATTCAACCTTCCCACCTGGGGTTTCAAGGCTCAAGTTCTTAAGGGTCTTCAATGCTTACAGCAACAACTTCATCGGACCTCTGCCTCAGGAATTTATGAGACTTCGGTTTCTTGAGCAGTTAAACCTTGGAGGAAGCTACTTCAATGAAAGTATTCCTTCAGGTTATGGTAGTTTACCCAGATTGAAGTTCCTTCATTTGGCTGGGAATCTCTTGGAGGGTCCAATACCAAATCAGTTAGGCTTCTTACCACAGCTTGAACGTTTAGAAATAGGGTATAACCAGTTTTCAGGAGGATTACCTGTGGAATTGACATTGTTGTCCAATCTCAAGTACTTGGATATTTCCTCTGCTAATATTTCAGACTCTGTGATGCCTGAGCTTGGAAACTTGACTATGCTGGAGACATTGTTGCTGTTCAAGAATCGGTTAAGTGGTGAAATCCCGTCAAGCTTGGGAAATTTGAAGGCTCTGAAAGCTCTTGATTTGTCGGATAATCAACTCACTGGGTCGATTCCTGAGGAAATTTCAATGTTGAAGGAACTGACTATATTGAGCTTAATGGATAACAAGCTAACTGGGGAGATACCCCAAGGGATTGGAGACCTTCCAATGCTCGACACTCTGCAACTATGGAACAATTCATTGACTGGGGTTCTTCCACTGAGACTTGGCTCCAATGGGTTACTCCAGAAACTCGATGTGTCCACAAATTCATTGACGGGTCCAATTCCACCAGGCGTGTGCAATGGGAGCAAGCTTATTAAGTTCATTCTGTTTCAAAACAAATTTTATGGCGCTATTCCAGAATCACTGGCAGATTGTACTTCGTTAATAAGGGTTAGAATCCAAAACAACCAGTTCAATGGATCCATACCTGCTGGTTTTGGCCAATTGCCGAACCTTGTCTACGTCGATTTGAGCAACAACAACTTCACGGGTCGAATTTCTGAGGACTTCGGGAATTCTGTGAAGTTGCAATTCTTGAACATCTCCGGAAATCCCTTCGAATCCCCATTACCCAGCAACATTTGGAAAGCCGATAACCTACAGATTTTCTCGGCGAGTTCTTCGAAAATCAATGGTCCGATTCCAGATTTTATTGGTTGCAAGAACATTTACAGAATCGAATTACAGGGGAATTCGCTCAATGGTAGCATCCCTTGGGACGTAGGCCACTGCGAGAGGCTTATTGTACTGAATCTGAGTCGCAACTCGCTTGCTGGTATCATCCCGTGGGAAATCTCCGTTTTGCCCTCCATCACCGACGTCGACCTATCCCACAATTCTCTCTCCGGTACCATACCCTCCAATTTCAACAATTGCACCACACTCGAGAACTTCAATGTCTCGTTCAATTCCCTCACCGGACCCATCCCTTCGTCCGGTTCGATCTTCCCGAACCTCCACCCCTCCTCCTTCTCCGGCAACGACGGCCTATGCGGGGACATTCTAGGGAAGCCCTGCTCGCCGAGCACCGTCGACGCAGCCCAGGCGGACAACACCGCGGAGGACCAGCAGCGCCCCAAGAGAACAGCCGGCGCCGTCGTATGGATAGTCGCTGCGGCGGTAGCGATCGGGCTCTTCGCCCTCGTCGCAGGGACCCGATGCTTCCGGGCGAATCACAACCGTCCATTCAGCGACACCCGCGAGATCGGACCGTGGAAATTAACCGCGTTCCAACGGTTGAATTTCACAGCGGAGGATGTACAAGAATGCTTAACAGTATCGAATAAGATCATAGGGATGGGGTCCACAGGCACAGTGTACAAGGTCGAGATGCCAAGTGGCGAGATCGTGGCCGTTAAGAAATTATGGGGGAAGCAGAAGGAGGGAAGCATCCGACGGAGGAGAGGGGTTCTAGCTGAGGTGGAGGTGCTAGGGAACGTGAGGCACAGGAACATAGTGAGATTGTTAGGGTGTTGCAGCAACAGGGAGTGCACGATGCTGCTTTACGAGTACATGCCCAATGGGAACTTAGAGGATTTATTACACGGGAAAAATAAGAGGGAGAATCTGGTCGCTGATTGGTTGACAAGGTATAAGATTGTGTTCGGGGTGGCGCAGGGGATTTGCTATCTTCACCACGACTGTGATCCGGTGATCGTGCACCGCGATCTCAAGCCCAGTAATATTTTATTGGACGGTGAGATGGAGGCCAGGGTGGCAGATTTTGGAGTGGCTAAGCTGATTCAAAGTGATGAGTCCATGTCTGTTATTGCTGGATCTTATGGCTACATTGCACCTGAATATGCTTATACCCTACAAGTTGATGAGAAGAGTGATATCTACAGCTTCGGAGTGGTGTTAATGGAGATTCTAAGTGGAAAACGATCTGTCGACGCAGAGTTTGGGGATGGAAATAGCATTGTGGATTGGATTAAGTTTAAGATCAAAACCAAAGATGGCATTAATGACATTTTGGACAAGAATGCAGGAGCCGAGTGTGCATCGGTAAGAGACGAGATGATACAAATGCTTAGAATTGCATTGCTTTGTACAAGTCGAAACCCTGCAGATCGACCCTCCATGAGAGATGTTGTGTTGATGCTTCAAGAGGCAAGGCCAAAAAGGAAATTGTTCGATAATGTGGTAGGACAATGTGGTGATATTAACAATGTCGTTGGTGGGGGAGATGATATTGTTTTGTCAAAAAAGCCAAAAGTAGAAAGCTAG 3120 0.4699 MKPPSLFFLTFFFFSFFFFLSQTHLVYSAKPARTSLPFQLISLLSLKSSLIDPLNTLHDWDYPSDHSNNSQEPIWCSWSGVMCHPRAPHITTLDLSKRNLSGSISPQIRYLTTLNHLNLSGNDFNGTFPPAIFELPELRTLDISHNFFNSTFPPGVSRLKFLRVFNAYSNNFIGPLPQEFMRLRFLEQLNLGGSYFNESIPSGYGSLPRLKFLHLAGNLLEGPIPNQLGFLPQLERLEIGYNQFSGGLPVELTLLSNLKYLDISSANISDSVMPELGNLTMLETLLLFKNRLSGEIPSSLGNLKALKALDLSDNQLTGSIPEEISMLKELTILSLMDNKLTGEIPQGIGDLPMLDTLQLWNNSLTGVLPLRLGSNGLLQKLDVSTNSLTGPIPPGVCNGSKLIKFILFQNKFYGAIPESLADCTSLIRVRIQNNQFNGSIPAGFGQLPNLVYVDLSNNNFTGRISEDFGNSVKLQFLNISGNPFESPLPSNIWKADNLQIFSASSSKINGPIPDFIGCKNIYRIELQGNSLNGSIPWDVGHCERLIVLNLSRNSLAGIIPWEISVLPSITDVDLSHNSLSGTIPSNFNNCTTLENFNVSFNSLTGPIPSSGSIFPNLHPSSFSGNDGLCGDILGKPCSPSTVDAAQADNTAEDQQRPKRTAGAVVWIVAAAVAIGLFALVAGTRCFRANHNRPFSDTREIGPWKLTAFQRLNFTAEDVQECLTVSNKIIGMGSTGTVYKVEMPSGEIVAVKKLWGKQKEGSIRRRRGVLAEVEVLGNVRHRNIVRLLGCCSNRECTMLLYEYMPNGNLEDLLHGKNKRENLVADWLTRYKIVFGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQSDESMSVIAGSYGYIAPEYAYTLQVDEKSDIYSFGVVLMEILSGKRSVDAEFGDGNSIVDWIKFKIKTKDGINDILDKNAGAECASVRDEMIQMLRIALLCTSRNPADRPSMRDVVLMLQEARPKRKLFDNVVGQCGDINNVVGGGDDIVLSKKPKVES 1039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2345 1039 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 267 1000 - -
Bisa02g2345 1039 Pfam Protein kinase domain 726 996 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g2345 1039 FunFam Leucine-rich repeat receptor-like protein kinase TDR 324 639 - -
Bisa02g2345 1039 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 225 320 - -
Bisa02g2345 1039 PRINTS Leucine-rich repeat signature 306 319 - -
Bisa02g2345 1039 PRINTS Leucine-rich repeat signature 566 579 - -
Bisa02g2345 1039 ProSitePatterns Serine/Threonine protein kinases active-site signature. 850 862 IPR008271 GO:0004672|GO:0006468
Bisa02g2345 1039 SMART serkin_6 723 999 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g2345 1039 ProSiteProfiles Protein kinase domain profile. 723 1009 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g2345 1039 Gene3D Transferase(Phosphotransferase) domain 1 803 1015 - -
Bisa02g2345 1039 FunFam leucine-rich repeat receptor-like protein kinase TDR 803 1011 - -
Bisa02g2345 1039 SUPERFAMILY L domain-like 320 629 - -
Bisa02g2345 1039 Pfam Leucine Rich Repeat 544 566 IPR001611 GO:0005515
Bisa02g2345 1039 Pfam Leucine rich repeat N-terminal domain 40 83 IPR013210 -
Bisa02g2345 1039 Pfam Leucine rich repeat 426 483 IPR001611 GO:0005515
Bisa02g2345 1039 Pfam Leucine rich repeat 282 340 IPR001611 GO:0005515
Bisa02g2345 1039 FunFam Leucine-rich repeat receptor-like protein kinase 39 200 - -
Bisa02g2345 1039 SMART LRR_typ_2 566 589 IPR003591 -
Bisa02g2345 1039 SMART LRR_typ_2 351 375 IPR003591 -
Bisa02g2345 1039 SMART LRR_typ_2 447 470 IPR003591 -
Bisa02g2345 1039 SMART LRR_typ_2 255 279 IPR003591 -
Bisa02g2345 1039 SMART LRR_typ_2 303 327 IPR003591 -
Bisa02g2345 1039 SMART LRR_typ_2 135 159 IPR003591 -
Bisa02g2345 1039 SMART LRR_typ_2 207 231 IPR003591 -
Bisa02g2345 1039 SUPERFAMILY Protein kinase-like (PK-like) 726 999 IPR011009 -
Bisa02g2345 1039 ProSitePatterns Protein kinases ATP-binding region signature. 729 752 IPR017441 GO:0005524
Bisa02g2345 1039 Gene3D Ribonuclease Inhibitor 325 644 IPR032675 -
Bisa02g2345 1039 ProSiteProfiles Leucine-rich repeat profile. 305 327 IPR001611 GO:0005515
Bisa02g2345 1039 Gene3D Ribonuclease Inhibitor 40 324 IPR032675 -
Bisa02g2345 1039 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 691 802 - -
Bisa02g2345 1039 SUPERFAMILY L domain-like 74 390 - -
Bisa02g2345 1039 Gene3D Phosphorylase Kinase; domain 1 703 802 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2345 Bisa-ChrBisa02 56490390 56495432 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2345 1 1014 Receptor kinase-like Gene Family AT1G08590 43.243 0.0 780
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa02g2345 Pkinase 8.2e-48 CL0016