Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2334 ATGGCCAAAAATCTTTGGCTAAATCTGATCATATTTCTTATTTCCTTATTCTCTTGCACCTCTCCATCTCTTTCAAGCAATCTCTCCGAAGCCCTAATCAATTATTGGTGCAAGAAAACCCCACACCCTTCAACATGTTTGCACTACGCAAGAAGCCACCACCTCCAAGACGGCGTCGTTCCACGAACTGCCTCTCAGTTCAAAAAGCTCGTCCTTAAAATCGCCATAGACCAATCTCTCAAAGCCCAAAACCACAACAAGTGGCTCGGCTCCAAGTGCCGAAACAAACTCGAAACAGCGGCTTGGCGCGACTGCTTGACCCTCTACCAAGACACCATCTACCTTCTCAACCAAACCCTAGAAAGCTCCACCGTGCCGGCCACTGGCTATGACTTCCAGACCTGGCTCAGCGCTGCCATGACCAACCTCGACACCTGCCGAACTGGCTTCGTCGAGCTAGGGGTCGCTGACGGGGTCCTACCCCTCATAAACAACAAGAATGTTTCGGACATTATCAGTAACACATTGGCTTTGAACAAGGGCGCGTCGGCTAAGGCCGAGACCAACAGTTACAAGGACGGGTTCCCGGCGTGGGTGTCGCCGGGAGACCGGAAGCTGCTGCAGACGACGACGGTGACGCCAGATGTTGTGGTGGCCAAGGACGGGTCCGGGGACTATAGGACCATTAAGGAGGCTTTGGAGGAGGCTTCCAAGAGGAGTACGAGTGGGAGGTTTGTGATATATCTGAAGCCAGGGGCGTACGATGAAAACCTTGAGATTGGGAAGAGTTTGAAGAATATTATGTTGTATGGTGATAGTATGAGGCTCACTGTTATCACTGGGAGCAAGAGTGTTGGGGGAGGTTCCACTACTTTTAACTCTGCAACTGTTGCTGTGACAGGAGAAGGATTCATCGCTCGTGGCATAACTTTTCGCAATACCGCTGGCCCTCAAAACCACCAAGCCGTAGCACTACGTTCAGGCGCTGACCTCTCTGTCTTCTATCGCTGTGGCTTCGAAGGCTACCAAGACACTCTCTATGTCCATTCCCAGAGGCAATTCTACAAAGAATGCTACATCTATGGCACCGTAGACTTCATCTTTGGCAACGCCGCCGTCGTCCTCCAAAACTGCATGATCCTCGCCCGGCGGCCCATGGACCAGCAAAAGAACACCATCACGGCCCAAGGCCGAACCGACCCGAACCAAAACACCGGAATTTCCATCCACAATTCGCGTGTTATGGCCACGGCGGACCTAGTCCCGGTGCTCGGCTCCTTCCAAACCTTCCTCGGAAGGCCGTGGAAGCAGTACTCGAGGACGGTGTTCATGCAAACTTACCTTGATACCTTGGTGGACCCTAAGGGTTGGTTGGAGTGGGATGGCAATTTTGCCCTAAGTACATTGTATTATGGAGAGTACAGGAATCTTGGCCCCAGAGCTTCCACTAGTGGCAGGGTTAACTGGGGTGGTTACCGTGTCATAACGAGTGCAAGCGAGGCGTCCCAATTCACCGTTGAGAATTTTATCGCCGGTCAGTCGTGGCTGCCGGCCACTGGCGTACCGTTCCGGGCCGGGCTATGA 1584 0.5271 MAKNLWLNLIIFLISLFSCTSPSLSSNLSEALINYWCKKTPHPSTCLHYARSHHLQDGVVPRTASQFKKLVLKIAIDQSLKAQNHNKWLGSKCRNKLETAAWRDCLTLYQDTIYLLNQTLESSTVPATGYDFQTWLSAAMTNLDTCRTGFVELGVADGVLPLINNKNVSDIISNTLALNKGASAKAETNSYKDGFPAWVSPGDRKLLQTTTVTPDVVVAKDGSGDYRTIKEALEEASKRSTSGRFVIYLKPGAYDENLEIGKSLKNIMLYGDSMRLTVITGSKSVGGGSTTFNSATVAVTGEGFIARGITFRNTAGPQNHQAVALRSGADLSVFYRCGFEGYQDTLYVHSQRQFYKECYIYGTVDFIFGNAAVVLQNCMILARRPMDQQKNTITAQGRTDPNQNTGISIHNSRVMATADLVPVLGSFQTFLGRPWKQYSRTVFMQTYLDTLVDPKGWLEWDGNFALSTLYYGEYRNLGPRASTSGRVNWGGYRVITSASEASQFTVENFIAGQSWLPATGVPFRAGL 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2334 527 CDD PMEI-like_3 36 184 - -
Bisa02g2334 527 ProSitePatterns Pectinesterase signature 2. 360 369 IPR033131 -
Bisa02g2334 527 SMART PMEI_2 28 178 IPR006501 GO:0004857
Bisa02g2334 527 FunFam Pectinesterase 209 527 - -
Bisa02g2334 527 NCBIfam pectinesterase inhibitor domain 7 181 IPR006501 GO:0004857
Bisa02g2334 527 PANTHER PECTINESTERASE 20 517 - -
Bisa02g2334 527 Pfam Pectinesterase 215 512 IPR000070 GO:0030599|GO:0042545
Bisa02g2334 527 SUPERFAMILY Pectin lyase-like 209 526 IPR011050 -
Bisa02g2334 527 Gene3D - 209 527 IPR012334 -
Bisa02g2334 527 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Bisa02g2334 527 Pfam Plant invertase/pectin methylesterase inhibitor 32 178 IPR006501 GO:0004857
Bisa02g2334 527 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 180 IPR035513 -
Bisa02g2334 527 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 181 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2334 Bisa-ChrBisa02 56208479 56211040 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2334 7 527 Carbohydrate Esterase AT2G45220 60.269 0.0 625