Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2333 ATGGCATCAATCATCATTGTGAGGCTGTTCTTCACACTCGTATGGTTCTCTTCACTGTTCTCATTATCATCCTCAGCCAGATCACTAGCAGATTCCTCTTTAGATTGGTGGTGCAACCAAACGCCACACCGTGATCCATGTAAACACTTCATGACCCGCAGTCACCACCGGTTCAAACCGAAACACAGGTCCGAATTCCGGAAAATGCTGGTTCAATTAGCCATGGAGCAGGCCCAAGCCCTGCACAGCCCGGCCCAGGAAATGGGCCCAAAACGCATGACTGAGATGCGAAATGGAATATTCGCTGATTGTGTAAAGCTCTACGGCGACGCCATTCACCATCTAAACCGAACCCTTGAGGGCCTTCACAACGGCAATTGTTCAGTAGACGACGCCCAAACATGGCTCAGCGCCGCTCTTACGAACATCGAAACCTGCCGAATTGGCGCCTCGCAACTGAGCGTCGACGATTTCGCGGCGAATAATGCGAGCGACGTCGTTGGAAAGGTGATAAGCAATGTGTTAGCCGTTAATGGGGAATTTCTGATGGCAGAGGCAGGGAATCACGCAGAAGGACAAGAAGGGAAGGAGGATGGGTTTCCGAGGTGGTTTTCGAGGCGCGAGAGGAGGCTGTTGAGGTCGACGGCGTCTTCTGTGAAGGCGAATCTGGTGGTGGCAAAGGATGGTTCAGGGCATTTTAGGACTGTGCAAGAGGCCATAGATGTGGCGTCGACGAGAGGAATAAAGACAAGGTTTGTGATAAGAGTGAAAGGAGGGGTTTATGAAGAGAATATTGAAGTGGATATGGACAATGCTAATCTTATGATTGTTGGCGACGGGATGAGCAGTACCATAATCTCGAGTAATAGAAGCGTTCAAGACGGATATACCACTTACAGCACTGCAACTGCAGGCATAGATGGGCCTCACTTCATTGCACAAGATATCAGTTTTAGAAACACAGCAGCCCAAGGCCGAGGTGACCCCTATCAGAACACTGGGATTTCAATTGTCAATTCTCAAATTCGAGCTGCACCTGACTTCAGGCCCTTCATTCATGAATTCCAGACCTATTTAGGCCGACCATGGCAGCAATATTCCAGAGTGGTTATCATGAAAACCTCTATTGAGGGCTTGGTGAGCCCGTTTGGTTGGTCTCCATGGGGTAATACTAATTTTGCTCAAGATACATGTTATTTTGGGGAATATATGAACTATGGGAATGGTTCATCCACTAAAGATAGAGTGAAATGGCCAGGGTTTCATGCCATAACAACTCCAGATGAAGCAGCACAATTCACTGTGTCTAAACTCCTTGTTGGTCAGACATGGTTACCTTCCACCGGCGTACCTTTTGCTGCTGGCCTTTAA 1371 0.4836 MASIIIVRLFFTLVWFSSLFSLSSSARSLADSSLDWWCNQTPHRDPCKHFMTRSHHRFKPKHRSEFRKMLVQLAMEQAQALHSPAQEMGPKRMTEMRNGIFADCVKLYGDAIHHLNRTLEGLHNGNCSVDDAQTWLSAALTNIETCRIGASQLSVDDFAANNASDVVGKVISNVLAVNGEFLMAEAGNHAEGQEGKEDGFPRWFSRRERRLLRSTASSVKANLVVAKDGSGHFRTVQEAIDVASTRGIKTRFVIRVKGGVYEENIEVDMDNANLMIVGDGMSSTIISSNRSVQDGYTTYSTATAGIDGPHFIAQDISFRNTAAQGRGDPYQNTGISIVNSQIRAAPDFRPFIHEFQTYLGRPWQQYSRVVIMKTSIEGLVSPFGWSPWGNTNFAQDTCYFGEYMNYGNGSSTKDRVKWPGFHAITTPDEAAQFTVSKLLVGQTWLPSTGVPFAAGL 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2333 456 SUPERFAMILY Pectin lyase-like 218 455 IPR011050 -
Bisa02g2333 456 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 179 IPR035513 -
Bisa02g2333 456 Pfam Plant invertase/pectin methylesterase inhibitor 34 176 IPR006501 GO:0004857
Bisa02g2333 456 NCBIfam pectinesterase inhibitor domain 10 178 IPR006501 GO:0004857
Bisa02g2333 456 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 181 IPR035513 -
Bisa02g2333 456 PANTHER PECTINESTERASE 11 322 - -
Bisa02g2333 456 CDD PMEI-like_3 36 181 - -
Bisa02g2333 456 Pfam Pectinesterase 322 441 IPR000070 GO:0030599|GO:0042545
Bisa02g2333 456 Gene3D - 325 456 IPR012334 -
Bisa02g2333 456 SMART PMEI_2 29 177 IPR006501 GO:0004857
Bisa02g2333 456 Gene3D - 215 324 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2333 Bisa-ChrBisa02 56187945 56190796 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2333 323 456 Carbohydrate Esterase AT5G51490 51.111 2.04e-43 158