Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2332 ATGGCATCAATCATCGTTGTGAGGCTATTCTTCGTACTAGTATTGTTCTCATCACTGTTCTCAGTATCATCGTCAACAAGATCACCAGCTGAGTCCTCTATAGATTGGTGGTGCAATAAAACGCCACACCCCGAGCCATGCAAACATTTCATGAGCCACGGCCATCGCCGGTTCAGACCGAAACACAAATCCGACTTCCGGAACATGCTGGTTCAATTAGCCATGGACCAGGCCCAATCCATGCATAGCCAGGCCCACGAGATGGGCCCAAAATGCCTGACCGAGAAGCAGAAATGTTTGTTCACCGATTGTGTAAAGCTGTACAACGACGCCATTTTTCATCTAAACCGAACCCTTGAAGGCCTTCACGGCGCCGATTGTACACTGCATGACGCCCAAACATGGTTCAGTGCCGCTCTTACGAACATCGAAACGTGCCGAATCGGCGCCTCGCAATTGAACGTCACTGATTTCGTCACTAATGATGTGAGTGACGACGTTAGAAAGATGATAAGCAATGTGTTAGCCATTAATGGGGAGTTTCTGAAGGCAGAGGCTGGGAATCACACAGAAGGAAAAGAAGAGAAGGAGGATGGGTTCCCAAGGTGGTTTTCGACTCACGAAAGGAGGCTATTGAGATCGTCGGCTTCTTCCATGAAGGCGCATATTGTGGTGGCGAAGGATGGTTCAGGGCATTTCAGGACTGTGCAGGAGGCCATAGATGCGGCGTCGAGGAGAAGAGTGAAGACGAGGTTTGTGATAAGAGTGAAGAAAGGGGTTTATGAAGAGAACATTGAGGTGGATCAGGAGAATGCTAGTCTTATGATTGTTGGGGATGGGATGAGAGTCACCATAATCACAAGTAGTAGAAGCTCTCAAGACGGATATACCACTTACAGCTCTGCGACTGCTGGCATAGATGGACCTCACTTCATTGCACGAGACATCACCTTTAGAAACACAGCGGGTGCAGAAAAGGGTCAAGCAGTGGCACTTCGATCAGCCTCTGACCTCTCCATCTTTTATCGGTGCGCCATTGAAGGTCATCAAGACACCTTAATGGCCCACGCACAGAGGCAGTTCTATCGGGATTGTAGGATCTTTGGCACTGTGGATTTCATATTTGGGAATGCTGCTGTGGTATTACAAAATTGCGTGATTCTGGTAAGAAGGCCTTTGGAGGGGCAAGCAAATACGATCACAGCCCAAGGCCGAGGTGACCCCTATCAGAACACTGGCATTTCAATCCTCAATTCTCAAATCCGAGCCGCACCAGAGTTCAGGCCCTTCATTCACACATACCAGACCTATATGGGGCGACCCTGGCAGCAATACTCTAGAGTGGTTGTCATGAAAACCTACATTGAAAGCTTGGTGACCCCATTAGGCTGGTCTCCATGGGGCGACTCTAATTTTGCTCAAGACACGTGTTATTTTGGAGAATATATGAACCATGGGGCTGGTTCATCTACAAAAAATAGAGTGAAATGGCCAGGGTTTCATGCCATAACAAGCCCAGATGAGGCAGCACAATTCACTGTAGCCAGACTCCTAGCTGGTCAAACATGGTTGCCTTCCACTGGAGTGCCTTTTGCTTCTGGCCTTTGA 1608 0.4851 MASIIVVRLFFVLVLFSSLFSVSSSTRSPAESSIDWWCNKTPHPEPCKHFMSHGHRRFRPKHKSDFRNMLVQLAMDQAQSMHSQAHEMGPKCLTEKQKCLFTDCVKLYNDAIFHLNRTLEGLHGADCTLHDAQTWFSAALTNIETCRIGASQLNVTDFVTNDVSDDVRKMISNVLAINGEFLKAEAGNHTEGKEEKEDGFPRWFSTHERRLLRSSASSMKAHIVVAKDGSGHFRTVQEAIDAASRRRVKTRFVIRVKKGVYEENIEVDQENASLMIVGDGMRVTIITSSRSSQDGYTTYSSATAGIDGPHFIARDITFRNTAGAEKGQAVALRSASDLSIFYRCAIEGHQDTLMAHAQRQFYRDCRIFGTVDFIFGNAAVVLQNCVILVRRPLEGQANTITAQGRGDPYQNTGISILNSQIRAAPEFRPFIHTYQTYMGRPWQQYSRVVVMKTYIESLVTPLGWSPWGDSNFAQDTCYFGEYMNHGAGSSTKNRVKWPGFHAITSPDEAAQFTVARLLAGQTWLPSTGVPFASGL 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2332 535 Pfam Plant invertase/pectin methylesterase inhibitor 33 177 IPR006501 GO:0004857
Bisa02g2332 535 CDD PMEI-like_3 36 183 - -
Bisa02g2332 535 PANTHER PECTINESTERASE 9 525 - -
Bisa02g2332 535 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 181 IPR035513 -
Bisa02g2332 535 ProSitePatterns Pectinesterase signature 2. 367 376 IPR033131 -
Bisa02g2332 535 FunFam Pectinesterase 216 535 - -
Bisa02g2332 535 NCBIfam pectinesterase inhibitor domain 10 179 IPR006501 GO:0004857
Bisa02g2332 535 Gene3D - 215 535 IPR012334 -
Bisa02g2332 535 SMART PMEI_2 29 177 IPR006501 GO:0004857
Bisa02g2332 535 Pfam Pectinesterase 222 520 IPR000070 GO:0030599|GO:0042545
Bisa02g2332 535 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 181 IPR035513 -
Bisa02g2332 535 SUPERFAMILY Pectin lyase-like 217 534 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2332 Bisa-ChrBisa02 56181344 56183104 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2332 37 535 Carbohydrate Esterase AT5G51490 56.805 0.0 597