Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2329 ATGGCATCAATCATTGTTGTGAGGCTATTCTTCGTACTCGTATTGTTCTCTTCACTGTTCTCAGTATCATCGTCAACAAGATCAACAGCTGATTCCTCTATAGATTGGTGGTGCAATAAAACGCCACACCCTGAGCCATGCAAACATTTCATGAGCCACGGCCATCGCCGGTTCAGACCGAAACACAAGTCCGAGTTCCGGAACATGCTGGTTCAATTAGCCATGGACCATGCCCAATCCATGCATAGCCGGGCCCACGAGATGGGCCCAAAATGCGTGACCGAGAAGCAGAAATGTTTATTCACCGATTGTGTAAAGCTGTACAACGACGCCATTTTCCATCTAAACCGAACCCTTGAAGGCCTTCACGGCGTCGATTGTACACTGCATGACGCCCAAACATGGCTCAGTGCCGCTCTTACGAACATCGAAACGTGCCGAATCGGCGCCTCGCAATTGAACGTCACTGATTTCGTCACTAATGATGTGAGTGACGACGTTAGAAAGATGATAAGCAATGTGTTAGCCATTAATGGGGAGTTTCTGAAGGCAGAGGCTGGGAATCACACAGAAGGAAAAGAAGAGAAGGAGGATGGGTTCCCAAGGTGGTTTTCGACGCACGAAAGGAGGCTATTGAGATCGTCGGCTTCTTCCGTGAAGGCGCATATTGTGGTGGCGAAGGATGGTTCAGGGCATTTCAGGACTGTGCAGGAGGCCATAGATGCGGCGTCGAGGAGAAGAGTGAAGACGAGGTTTGTGATAAGAGTGAAGAAAGGGGTTTATGAAGAGAACATTGAGGTGGATCAGGAGAATGCTAATCTTATGATTGTTGGGGATGGGATGAGAGTCACCGTAATCACAAGTAGTAGAAGCTCTCAAGACGGATATACCACTTACAGCTCTGCAACTGCAGCCGCACCAGAGTTCAGGGCCTTCATTCACACATACCAGACCTATATGGGCCGACCCTGGCAGCAATACTCCAGAGTGGTTGTCATGAAAACCTACATTGAAAGCTTGGTGACCCCATTAGGCTGGTCTCCATGGGGCGACTCTAATTTTGCTCAAGACACGTGTTATTTTGGAGAATATATGAACCACGGGGCTGGTTCATCTACAAAAAATAGAGTGAAATGGCCAGGGTTTCATGCCATAACAAGCCCAGATGAGGCAGCACAATTCACTGTGGCCAGACTCCTGGCTGGTCAAACATGGTTGCCTTCCACTGGAGTGCCTTTTGCTTCTGGCCTTTGA 1254 0.4872 MASIIVVRLFFVLVLFSSLFSVSSSTRSTADSSIDWWCNKTPHPEPCKHFMSHGHRRFRPKHKSEFRNMLVQLAMDHAQSMHSRAHEMGPKCVTEKQKCLFTDCVKLYNDAIFHLNRTLEGLHGVDCTLHDAQTWLSAALTNIETCRIGASQLNVTDFVTNDVSDDVRKMISNVLAINGEFLKAEAGNHTEGKEEKEDGFPRWFSTHERRLLRSSASSVKAHIVVAKDGSGHFRTVQEAIDAASRRRVKTRFVIRVKKGVYEENIEVDQENANLMIVGDGMRVTVITSSRSSQDGYTTYSSATAAAPEFRAFIHTYQTYMGRPWQQYSRVVVMKTYIESLVTPLGWSPWGDSNFAQDTCYFGEYMNHGAGSSTKNRVKWPGFHAITSPDEAAQFTVARLLAGQTWLPSTGVPFASGL 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2329 417 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 181 IPR035513 -
Bisa02g2329 417 Pfam Plant invertase/pectin methylesterase inhibitor 33 177 IPR006501 GO:0004857
Bisa02g2329 417 Gene3D - 309 417 IPR012334 -
Bisa02g2329 417 Gene3D - 215 308 IPR012334 -
Bisa02g2329 417 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 181 IPR035513 -
Bisa02g2329 417 SMART PMEI_2 29 177 IPR006501 GO:0004857
Bisa02g2329 417 CDD PMEI-like_3 36 183 - -
Bisa02g2329 417 SUPERFAMILY Pectin lyase-like 217 416 IPR011050 -
Bisa02g2329 417 NCBIfam pectinesterase inhibitor domain 10 179 IPR006501 GO:0004857
Bisa02g2329 417 Pfam Pectinesterase 306 402 IPR000070 GO:0030599|GO:0042545
Bisa02g2329 417 PANTHER PECTINESTERASE 9 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2329 Bisa-ChrBisa02 56088200 56089960 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2329 295 417 Carbohydrate Esterase AT5G51500 45.968 7.71e-36 136