Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2321 ATGGATTGGAGTCGCGGATTGAATGCGGCAGCTAAATTACTGTTCGTCTTGTTTTTTGTGCATCTAATCATTCTATGGATAGTGTGCTTTGTATTACCACAAAAGCGTACTGCTTGTTTAGCTGTAATGTTAACTGCAATTGCGTGTGGAGTTTCTTCGTTGCTTTCTGCTATCTTGTTGTCTTGTATTTCTGAGGGAAATACAGCGACAGAAATTGAAGTTCAGGTTTCTCAGAGTAGACAACCAAGCGGATCGATCACAATGGAGTTCCCTCCAAGCTTAAATAGTTCGAGGACGCTAATGATGTTCTTGCCGCAAACCAAAAGCTTCACAAGTACCAGCAGGGACGAAACGGCGACGTCTTCCATAGGATCCAAAGACGAGTACGAGTGTGCTATTTGCTTGGAAGAATTCAAGAACGGAGAGTCGATTCAGTCTCTTCCGTGTGATCACCAGTTTCATGCCTCTTGCATCAATTCTTGGTTGCACGGTGGAAAAACGACTTGCCCTAAATGCCGTTTTTGTTTGCGGGATCTATTAATGAACAGAAGCATATATGTTGATTATAGAATTTTTCTATGA 582 0.421 MDWSRGLNAAAKLLFVLFFVHLIILWIVCFVLPQKRTACLAVMLTAIACGVSSLLSAILLSCISEGNTATEIEVQVSQSRQPSGSITMEFPPSLNSSRTLMMFLPQTKSFTSTSRDETATSSIGSKDEYECAICLEEFKNGESIQSLPCDHQFHASCINSWLHGGKTTCPKCRFCLRDLLMNRSIYVDYRIFL 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2321 193 ProSiteProfiles Zinc finger RING-type profile. 131 173 IPR001841 -
Bisa02g2321 193 Pfam Ring finger domain 130 173 IPR001841 -
Bisa02g2321 193 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 97 178 IPR013083 -
Bisa02g2321 193 SMART ring_2 131 172 IPR001841 -
Bisa02g2321 193 CDD RING-H2_RNF103 125 173 - -
Bisa02g2321 193 SUPERFAMILY RING/U-box 115 179 - -
Bisa02g2321 193 PANTHER TARGET OF ERK KINASE MPK-1 85 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2321 Bisa-ChrBisa02 55917610 55918191 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2321 116 174 C3H Transcription Factor Family AT3G55530 47.458 5.96e-14 66.6