Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2319 ATGAATGAAAATTCATCGACGACGTCGTCCGGAACCACTTGGCGTCGGAGCTTCCACGGCGCTGCAAAATTACTAGCCTTCCTTTCACTGGGCCAACTCATCACCGCGTGGATACTTTGCTATGCAAAACCAGAGACTCCAATTGTGAAGACGACTAGTTCAGCCATCTACGTAAACGGATTCATGTGTGGACTGCTATCGCTTATTTTATCCATGTGTGGTATTTATACAAACAGCGGGCCTGAATTGGAGCTTGAGCCTTTTCAGAGAGATCAGGGACGAAGGGAATCGACTGTCGAATTCGTACTGGAGTTGCGTCGTCCGAGTGTGAATGTTTCTGCGATGGCAATGGCAATGCGATTCTTGCCGCCTCTCAAGAGCTTCGAAAGTGGGAGTGAGGAAACGACGTCGTCGCCGTCCAGGGAGGAGTGTGCTATTTGCTTGGAGGAATTCAAAAATGGAGAGCTGATTCAGCCTTTTCCATGCGACCATGAGTTTCACGCGTCTTGCATCAATTCTTGGGTGCTCAGTGGGAAAACGACGTGTCCTAAATGCCGTTTTTGCTTGGGAGACCTATTAATGGACACAAGCATGCAAGCTGGCCTACACTATAGCTAG 618 0.4887 MNENSSTTSSGTTWRRSFHGAAKLLAFLSLGQLITAWILCYAKPETPIVKTTSSAIYVNGFMCGLLSLILSMCGIYTNSGPELELEPFQRDQGRRESTVEFVLELRRPSVNVSAMAMAMRFLPPLKSFESGSEETTSSPSREECAICLEEFKNGELIQPFPCDHEFHASCINSWVLSGKTTCPKCRFCLGDLLMDTSMQAGLHYS 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2319 205 SUPERFAMILY RING/U-box 143 190 - -
Bisa02g2319 205 Pfam Ring finger domain 143 186 IPR001841 -
Bisa02g2319 205 CDD RING-H2_PA-TM-RING 143 186 - -
Bisa02g2319 205 SMART ring_2 144 185 IPR001841 -
Bisa02g2319 205 ProSiteProfiles Zinc finger RING-type profile. 144 186 IPR001841 -
Bisa02g2319 205 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 108 190 IPR013083 -
Bisa02g2319 205 PANTHER TARGET OF ERK KINASE MPK-1 132 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2319 Bisa-ChrBisa02 55886261 55886878 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2319 108 195 C3H Transcription Factor Family AT2G17450 37.634 9.44e-12 59.7