Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2269 ATGGCTTGCCCAGCAGCCACACAGGTTCCGTTACAGAACGCCCTCCTCCGTAACCGCCAAGCAACAAGGTTCCATTTCCTGCGAGCCCCAAGCACCGCTTCCATTAGCCCTCTGAGTCTTAGGGTTCGAGCCTCACAGACGTCGGAGGGCCCTGGCAAGCGCCAGAGAGCACCGCCTGGAGTGGACACAAGAATCCATTGGGACAACGAAGATGAAGGCTGGATCGGAAGCACCACTAAACAGCAAGCACAGCAGGATCCCAAGAATCTTCTGGGCGAAAACTTTTCCGATTTGCTTACTGATTCTTCTGGTTCTCATTATGAATTTTTGGGAGTGTCAGTAGAAGCTGATTTAGAAGAGATTAAAGCAGCTTACAGGAGATTATCAAAGGAATACCACCCAGACACCACCTCACTCCCTCTAAAAACAGCATCAGAAAAATTCATGAAGTTGAGAGAAGTTTACAATGTTCTGAGCAAGGATGAGAGTCGAAAATTTTACGATTGGACGCTTGTTCAAGAGGCTGCGAGCCGGCAATCGGAGAAGATGAAGATGAGATTAGAGGATCCTTCTGAGCAAGATGCGAAGAACTGGGAATCTGTTCCAGACATGGTTGATCGACTTGGAGGAAGGAATATGAAGCTTAGTGATCAAGCAGTGACTGCTCTCAGCATTGATATTTTCATAATTATTTTTGCCATTGGTTGTGTCATTTATGTAGTATTCTTTAAAGAACCATATTACTAG 747 0.4605 MACPAATQVPLQNALLRNRQATRFHFLRAPSTASISPLSLRVRASQTSEGPGKRQRAPPGVDTRIHWDNEDEGWIGSTTKQQAQQDPKNLLGENFSDLLTDSSGSHYEFLGVSVEADLEEIKAAYRRLSKEYHPDTTSLPLKTASEKFMKLREVYNVLSKDESRKFYDWTLVQEAASRQSEKMKMRLEDPSEQDAKNWESVPDMVDRLGGRNMKLSDQAVTALSIDIFIIIFAIGCVIYVVFFKEPYY 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2269 248 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT T, CHLOROPLASTIC 2 247 IPR044618 -
Bisa02g2269 248 SMART dnaj_3 104 163 IPR001623 -
Bisa02g2269 248 MobiDBLite consensus disorder prediction 42 65 - -
Bisa02g2269 248 FunFam DnaJ homolog subfamily C member 4 94 192 - -
Bisa02g2269 248 ProSiteProfiles dnaJ domain profile. 105 171 IPR001623 -
Bisa02g2269 248 Pfam DnaJ domain 106 168 IPR001623 -
Bisa02g2269 248 CDD DnaJ 106 159 IPR001623 -
Bisa02g2269 248 SUPERFAMILY Chaperone J-domain 105 173 IPR036869 -
Bisa02g2269 248 Gene3D DnaJ domain 94 192 IPR036869 -
Bisa02g2269 248 PRINTS DnaJ domain signature 125 140 IPR001623 -
Bisa02g2269 248 PRINTS DnaJ domain signature 143 163 IPR001623 -
Bisa02g2269 248 PRINTS DnaJ domain signature 107 125 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2269 Bisa-ChrBisa02 53959301 53961124 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2269 106 168 C2H2 Transcription Factor Family AT1G74250 40.299 8.85e-08 50.8