Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2259 ATGGCCGAAGAAGATTCTAAACCAACTCCACCTGTAACAGAGAAGAAAGACTCATCGCCGGCGCAGGTCACGGCTGAGTCCGATTTACCTACTGTAGCAACTACTTCAGCTGTGGAATCCACCACGATGGCGGTCACTGCTGAAACCAGTGAGCAGCCTCTTCCGCCTCCTTCAGAACCACCGGAAATGGTAGCAGCTATGATAACGGAGAAAGAGCCACCGCCGCCAACGACGGAGGAGACCGATGTAAAAGCTAAAAGTTCAGATGCTAAACAGGATGTCGTTGTGGTTCAGGATGAGGGATCGAAGAGCCTCGAGGAGCATAAGGTTCCGCAGAATCTGGTGTCGTTCAAGGAGGAGAGCAACAAAGTGGCTGATCTCTCGGATTCTCAGAGAAACGCTCTTGAAGAGCTGAAGCGGATGGTTCGAGAGGCATTAGACACTCACCAGTTCACTTCTCCACCGCCTAAAACGACGGCGGTGCAATCGGAAACCACTGCAGCAGCTAAGGAGGCTGCAAAAGCTGAAGGACACAGTTCGGAGTCAGACGCTAGCACTGAGGCAAAACCACCTCACGAAGCCAAAATCGAAGAAAACCCAGTGAAGGAAGCAGAGGAAGTGGGGAAAGAAACAACCGAGGAACAAATTTCGATTTGGGGAGTTCCTCTGCTCAAGGATGACAGGAGTGATGTGATTCTGCTGAAGTTTCTTAGAGCCCGAGAGTTCAAAGTGAAGGATGCATTTGTCATGATTAAGAACACAATCAACTGGAGGAAAGAGTTCAACATCGATGCGCTTGTGAATGAAGATCTTGGAGATGATTTAGAGAAAGTGGTGTTCATGCACGGATATGATAGAGAAGGGCATCCTGTTTGTTATAATGTGTATGGAGAGTTTCAGAACAAGGAGTTGTATCAGAAGACATTCTCAAATGAGGAAAAGCGAGCCAAATTTCTCCGATGGCGGACACAATTTTTGGAGAGGAGTATTAGGAAGCTTGACTTCAGTCCTGGTGGTATCAATACCATTTTCCAAGTTAATGACCTTAAAAATTCTCCCGGGCCTGGAAAGCGGGAGCTTCGGCTTGCTACCAAACAAGCCTTGCAATTGCTTCAGGACAATTATCCCGAGTTTGTTGCCAAACAGGTTTTCATCAATGTACCGTGGTGGTATCTTGCTTTCTATACGATGATCAATCCATTCTTGACACAGAGGACCAAAAGCAAATTTGTTTTTGCAGGTCCATCGAAGTCGGCTGAAACACTCTTCAAGTATATTTCTCCTGAACAAGTTCCAGTTCAATATGGTGGCCTAAGTGTAGATTTCTGTGACTGCAATCCAGAATTCAGCATGTCCGATCCCGTCACAGAGATACCTATAAAGCCTACCACAAAGCAAACTGTGGAAATCATTATTTATGAGAAATGCATTATTGTTTGGGAGCTGCGAGTGGTGGGCTGGGAGGTTAGCTATGGTGCTGAATTCAAGCCTGATGCACAAGATGGATATGCGATTATTATACAGAAGGCCATGAAGATGTCCTCAACTGATGAACCAGTGGTTTCTAATAGCTTTAAAGTTGGCGAACTTGGAAAATTATTGCTTACAATTGACAATCCAACATTGAAAAAGAAGAGGCTTTTGTACAGGTTCAAGATCAAAGCTCTCAGTGACTGA 1677 0.4562 MAEEDSKPTPPVTEKKDSSPAQVTAESDLPTVATTSAVESTTMAVTAETSEQPLPPPSEPPEMVAAMITEKEPPPPTTEETDVKAKSSDAKQDVVVVQDEGSKSLEEHKVPQNLVSFKEESNKVADLSDSQRNALEELKRMVREALDTHQFTSPPPKTTAVQSETTAAAKEAAKAEGHSSESDASTEAKPPHEAKIEENPVKEAEEVGKETTEEQISIWGVPLLKDDRSDVILLKFLRAREFKVKDAFVMIKNTINWRKEFNIDALVNEDLGDDLEKVVFMHGYDREGHPVCYNVYGEFQNKELYQKTFSNEEKRAKFLRWRTQFLERSIRKLDFSPGGINTIFQVNDLKNSPGPGKRELRLATKQALQLLQDNYPEFVAKQVFINVPWWYLAFYTMINPFLTQRTKSKFVFAGPSKSAETLFKYISPEQVPVQYGGLSVDFCDCNPEFSMSDPVTEIPIKPTTKQTVEIIIYEKCIIVWELRVVGWEVSYGAEFKPDAQDGYAIIIQKAMKMSSTDEPVVSNSFKVGELGKLLLTIDNPTLKKKRLLYRFKIKALSD 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2259 558 Gene3D GOLD domain 450 554 - -
Bisa02g2259 558 ProSiteProfiles GOLD domain profile. 448 553 IPR009038 -
Bisa02g2259 558 MobiDBLite consensus disorder prediction 149 209 - -
Bisa02g2259 558 FunFam SEC14 cytosolic factor family protein 273 453 - -
Bisa02g2259 558 PANTHER PATELLIN-1 78 555 IPR044834 GO:0008289
Bisa02g2259 558 SUPERFAMILY CRAL/TRIO domain 278 447 IPR036865 -
Bisa02g2259 558 Pfam CRAL/TRIO, N-terminal domain 212 253 IPR011074 -
Bisa02g2259 558 CDD SEC14 274 438 IPR001251 -
Bisa02g2259 558 SMART CRAL_TRIO_N_2 229 254 IPR011074 -
Bisa02g2259 558 MobiDBLite consensus disorder prediction 151 166 - -
Bisa02g2259 558 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 268 437 IPR001251 -
Bisa02g2259 558 SMART sec14_4 273 440 IPR001251 -
Bisa02g2259 558 SUPERFAMILY CRAL/TRIO N-terminal domain 122 269 IPR036273 -
Bisa02g2259 558 Pfam CRAL/TRIO domain 278 437 IPR001251 -
Bisa02g2259 558 MobiDBLite consensus disorder prediction 174 209 - -
Bisa02g2259 558 Gene3D - 150 449 IPR036865 -
Bisa02g2259 558 MobiDBLite consensus disorder prediction 75 89 - -
Bisa02g2259 558 PRINTS Cellular retinaldehyde-binding protein signature 232 254 - -
Bisa02g2259 558 PRINTS Cellular retinaldehyde-binding protein signature 395 414 - -
Bisa02g2259 558 MobiDBLite consensus disorder prediction 1 92 - -
Bisa02g2259 558 Coils Coil 124 148 - -
Bisa02g2259 558 MobiDBLite consensus disorder prediction 13 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2259 Bisa-ChrBisa02 53656221 53658209 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2259 233 432 Acyl Lipid Metabolism Gene Families AT1G55840 27.488 1.61e-09 57.4