Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2255 ATGGAAGACATAGAGGATTTGCTAATTGGAAGCGGAAACGGATCCCCGCCGGGCTTTCGTTTGCCATTGACGACCATTGGAGTGAATCCAAAGAGGAATAGGAACAAGGGTAGTCCTATTCACAGGCCTTCTCAAATCCAGGACTCTGCTTCTGCTATCTCGCTCTCCCAAAAAATTCCCGGCACTCAGACTATATATATAAAGACCTTCGGATGCTCACATAACCAGAGTGATAGCGAATATATGTCTGGTCAGCTTTCAGCTTTTGGTTATACCTTGAGTGACAATCCTGAGGAAGCAGACCTATGGCTTATAAATACGTGCACTGTGAAATCTCCGAGTCAATCTGCAATGGATACCATAATAGCGAAGGGCAAAAGTTCAAATAAACCTCTAGTGGTTGCTGGGTGTGTCCCTCAAGGAAGCCGAGGTTTGAAAGAGTTAGAAGGGATCAGCATAGTTGGAGTCCAGCAAATTGATCGTGTGGTTGAAGTTGTGGAGGAGACCCTAAAAGGTCATGAGGTGAGGCTTTTGACCCGTAAAACATTGCCGGCACTTGACCTTCCAAAGGTGAGGAAGAACAAGTTTGTTGAGATTCTTCCTATTAATGTTGGTTGTTTAGGTGCTTGCACTTACTGCAAGACAAAGCATGCTCGGGGTCACCTAGGGAGTTACTCAGTTGATAGCCTTGTAGGGCGATTAAGATCTGTCATTGCTGATGGGGTCAAAGAAGTATGGCTGAGCAGTGAAGATACTGGTGCTTATGGTCGTGACATTGGTGTCAATCTTCCAATTTTATTGAAGGCCCTGGTAAAAGAACTTCCAGCTGATGCAAGCACAATGCTTCGCATTGGAATGACCAATCCACCTTTTATCCTTGAGCACTTAAATGATATTGCAGAAATTTTGAGGCATCCCTGTGTGTACTCTTTTCTGCATGTACCAGTTCAGTCTGGAAGTGACAATGTCTTGAATGCAATGAATCGAGAATATACTGTAAATGAGTTCAGGACTGTTGTAGATACGTTGACTGACCTTGTGCCAGGGATGCAGATTGCCACTGATATAATATGTGGATTTCCTGGTGAAACTGAGGAAGATTTTGCTGAAACTGTTAGCCTAATTAAAGAGTATAAGTTTTCACAAGTTCATATTTCACAATTTTATCCCCGACCAGGAACACCTGCTGCAAGGATGAAAAAAGTTCCAAGTAATGTGGTGAAGAAAAGGAGTCGTGAACTGACAAATATTTTTGAAGCCTTCACTCCATATACTGGAATGGAGGGCAAAGTGGAAAGAATTTGGATTACAGATGTTGCATCTGATGGAATTCACTTGGTTGGTCATACAAAAGGATACATACAGGTTCTTGTAGCTGCTCCAGATTCTTTGCTAGGAACTTCAGCTATGGTTAAGATAACATCTGTGGGAAGGTGGTCCGTTTTTGGGGAAGTCATCGAGATACTCAACCATATAAGCGATGATAAAGCTTCAAGGAAGAAAATGCCTGATGAGGTTGTATCTTCTCTCTTCAATAACTCCCCCTGCACCGATAAATGCTCAGAAGAGGCAGAATCTTGTTGCTGTGGATACAACGACTTCTGTAGCCAAAGTACTACCAATAAAAATGTTGTTTCAAGAGATGCTACGTTGCCACAGAATCAAAACAGTGGAAATTTCATCGGATGGATACTGAGGAAGCGGAAGCATCTGCACAAAAAGGCAGAGAGCGAACTTGCCCTGGGATCAGATGAAAAGCAAGAAGGGAACCATGGGAGCATGAGAGAGTGGAGCTTTGTTGATAAGGCTCTTTTGGGTGGAATATTTATCAGCTTCTTAACGATCATTGTTGTTGTAGTTGCTCTTACGAATAGGGTTATTTGA 1884 0.4278 MEDIEDLLIGSGNGSPPGFRLPLTTIGVNPKRNRNKGSPIHRPSQIQDSASAISLSQKIPGTQTIYIKTFGCSHNQSDSEYMSGQLSAFGYTLSDNPEEADLWLINTCTVKSPSQSAMDTIIAKGKSSNKPLVVAGCVPQGSRGLKELEGISIVGVQQIDRVVEVVEETLKGHEVRLLTRKTLPALDLPKVRKNKFVEILPINVGCLGACTYCKTKHARGHLGSYSVDSLVGRLRSVIADGVKEVWLSSEDTGAYGRDIGVNLPILLKALVKELPADASTMLRIGMTNPPFILEHLNDIAEILRHPCVYSFLHVPVQSGSDNVLNAMNREYTVNEFRTVVDTLTDLVPGMQIATDIICGFPGETEEDFAETVSLIKEYKFSQVHISQFYPRPGTPAARMKKVPSNVVKKRSRELTNIFEAFTPYTGMEGKVERIWITDVASDGIHLVGHTKGYIQVLVAAPDSLLGTSAMVKITSVGRWSVFGEVIEILNHISDDKASRKKMPDEVVSSLFNNSPCTDKCSEEAESCCCGYNDFCSQSTTNKNVVSRDATLPQNQNSGNFIGWILRKRKHLHKKAESELALGSDEKQEGNHGSMREWSFVDKALLGGIFISFLTIIVVVVALTNRVI 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2255 627 SFLD B12-binding domain containing 144 410 - -
Bisa02g2255 627 SUPERFAMILY Radical SAM enzymes 186 420 - -
Bisa02g2255 627 FunFam threonylcarbamoyladenosine tRNA methylthiotransferase 64 183 - -
Bisa02g2255 627 Pfam Radical SAM superfamily 203 375 IPR007197 GO:0003824|GO:0051536
Bisa02g2255 627 FunFam threonylcarbamoyladenosine tRNA methylthiotransferase isoform X2 196 426 - -
Bisa02g2255 627 ProSiteProfiles Radical SAM core domain profile. 192 424 IPR007197 GO:0003824|GO:0051536
Bisa02g2255 627 PANTHER RADICAL SAM PROTEINS 1 623 - -
Bisa02g2255 627 ProSiteProfiles Methylthiotransferase N-terminal domain profile. 63 171 IPR013848 GO:0035596|GO:0051539
Bisa02g2255 627 SMART MiaB 196 417 IPR006638 GO:0003824|GO:0051536
Bisa02g2255 627 Pfam Uncharacterized protein family UPF0004 65 142 IPR013848 GO:0035596|GO:0051539
Bisa02g2255 627 SFLD Radical SAM 144 410 IPR007197 GO:0003824|GO:0051536
Bisa02g2255 627 ProSitePatterns Methylthiotransferase radical SAM domain signature. 200 220 IPR020612 GO:0051539
Bisa02g2255 627 Gene3D tm_1862 like domain 194 424 IPR023404 -
Bisa02g2255 627 MobiDBLite consensus disorder prediction 1 45 - -
Bisa02g2255 627 NCBIfam MiaB/RimO family radical SAM methylthiotransferase 64 481 IPR005839 GO:0006400|GO:0016740|GO:0051539
Bisa02g2255 627 Gene3D - 64 183 IPR038135 -
Bisa02g2255 627 CDD Radical_SAM 200 404 - -
Bisa02g2255 627 NCBIfam tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase 65 486 IPR006466 GO:0035598|GO:0035600
Bisa02g2255 627 ProSiteProfiles TRAM domain profile. 425 487 IPR002792 -