Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2225 ATGGGAGTTATTAGCATTGAAATATATGGAAATTCTGCTTTTGCTTTGCATTATAATGGAAATTCGTTTTCTTCACGCGGGGTTTCGATTTCTTGGAGACCCTTTCTCGGTATAGCTTTGAACACGAGAAACGCAAGGACAATTAAGGTTTTGCATCCTCAAAAGCTCAATTATGGGCCAATTAGTGTTAGTGCTTCACTGAAGAGTGGCAATGCTGGGTTGATAGGCGATGGTCTTCTTTCAAATGAATTAGAGTTTAAGCCATCCTTCGATGAATATTTGAAGGAAATGGAGTCTGCTAGAACTGTTAAGGGCAAGAAAATGGAGTCTGCCAGAACTGTTGGGGGCAAGAAGCATGCCAGTAATACTAAAAAACAGAAGAGGGAAAAGGGTACGTCGAGGAAACCAAGGTTGGAAGGGGATGAAGGAGGTAAAAAGGATGGGGCAATAAAAGTTTTTGATACAATTATGGGAAAAGAAGGCTCCTCCATAGGTAATGGTAAGCTTAGAGAAAGAGGAGCTAAGAGATTTAAACATGAGTACGATGAGAAGCAAAGCAAAGCTGATGTTACTGTAAAGCAGAAACAGGGAGCAGAGATAATAAAAGATAGATGGTTGAAACACCAGAATGATAGATCAAAACCACAATCTGATGACTGCAATTTGACTGAAAGTGAACGGGGAAGAATGGGCAATGGCGAAGCTTGGTCTAATTGGAACATTAACCGTAGCAACATCATCAAGGAGGAAGTCAGTCATGAATTACATTCTTTACAAACGGTAGGAGAAAAGGATGTTACTACCTACCAAGGGGACTATACGGCAGATAAAATTGTTGTTAGCAACAATGTTATGCGCAGAGGACTTGAGAGAAGCTACACAAAAGATAAGAATGTGGTGAAAGCAAAGGGACAGGAGAATGTCAAATTGAATGGCAGCAAGGATTTCGTTGATGGAGGTTACGATTATGACAACTTGGAGGTGGAAAGAGCAGCATTTAAGACTTTTGAGGAGTTTAATGGTGTTGTGAGCAAGTCACATTTTTCACACAAGGAAATGGAGGATAAAATTCAACGGCTAGCAAAATCGTTAAATGGTGCAGATATCAATATTCCAGAATGGATCTTTTCTAAGATGATGAGAAGTGCAAAGATAAAATTTAATGACTATTCTATGGTGAGGGTTATCCAAAGACTGGCAAAACTGGGAAACTGGAAGAGGGTGATACAGGTTACTGAATGGCTTCAAAGGCGTGAGCGCTTCAAATCTCATAAGCCAAGGCATATATACACTGCTGCTCTTGATGCGCTTGGCAAGGCAAGAAGACCTGTAGAGGCACTAAATGTATTTCATGCAATGCAGCAACAAATGTCCACATATCCTGATTTAGTAGCTTATCATAGTATTGCTGTCACTCTTGGACAAGCAGGGTACTTGAAGGAACTCTTTGATGTGATCGACAGCATGAGATCGCCCCCTAAGAAGAAGTTTAAAGTAGGGGTACTTGGGAACTGGGACCCAAGGCTGGAACCGGATATCATTGTATACAATGCTGTTCTCAATGCTTGTGTTCATCAGAAACAGTGGGAGGGGGCCTTTTGGGTTCTACAGCAATTAAAGACGCAAGGCCAACATCCCTCTGCTACAACTTATGGCCTTGTCATGGAGGTGATGTTTTCATGTGACAAGTACAACTTGGTTCATGAATTTTTCAAGAAAGTTCGGAAGTCTTCTATTCCTAATTCGTTGACATATAGAGTTCTTGTGAAAACACTATGGAAAGAGGGTAAAACTGATGAGGCTGTATTGGCTGTCCAAGAGATGGAAAGGCGTGGAATTGTAGGTTCTGCTTCTCTTTATTATGACCTTGCTCGATGTCTCTGTGTGGCTGGAAGATGTAGTGAGGCATTGATGCAGATAGAGAAGATAAGTAAGGTTGCAAACAAGCCACTGGTGGTGACATACACTGGCTTAATTCAGGCATGTGTGGAATCTGGAAACATCCAAGATGGGGCATACATTTTTGAAAAAATGAAGGATATTTGCTCTCCGAATCTTGTTACTTGTAACATGATGCTGAAAGCTTACCTGGAACATCGGATGTTTCAAGAAGCGAAAGAATTGTTTGAGAAGATGTTAGAAAACGCAAACCATGTGAGGAGAAATTCTGATTACAAAATTTGGGCGATACCAGATATTTACACGTTCAACACTATATTAGATGCATGCATTGCACAGAAGAGATGGAACTATTTTGATTACGTCTATCAAAAGATGCTATACCATGGTTACCACTTCAATCCAAAACGTCATCTTCGAATGATACTGGAGGCATCAAGAGCTGGAAAGGAAGGGCCTATTGAGGTAACATGGAAGCACTTGGTCCAAACAGATCGGATTCCTCCAGCTCTTCTAATCAAAGAAAGGTTCTGCGTAAAGCTTGAAAAAGGCGACCATGTTGAAGCCCTCACATGTATCACCAATAATGTCTCCAAGGACTTGCAGGCATTTTCCAAGTTGTCATGGTTGAATCTATTCGAAGCAAATGCCCAACGTTTTCAGAAGAATACCCTTGTTAGGTTAATGAATGAGGTTAACTACCTAGTTTCCAAGAGTAGCTTGCCAGTTCCAGCACTTGAAGCACTTGAGAATCTAATGCAGTCTTGGAACGAATTTTGCATCACTGACCTTAGTGTTACTGACACGAAACAGTTGGTTAACTCTAGATAA 2730 0.4088 MGVISIEIYGNSAFALHYNGNSFSSRGVSISWRPFLGIALNTRNARTIKVLHPQKLNYGPISVSASLKSGNAGLIGDGLLSNELEFKPSFDEYLKEMESARTVKGKKMESARTVGGKKHASNTKKQKREKGTSRKPRLEGDEGGKKDGAIKVFDTIMGKEGSSIGNGKLRERGAKRFKHEYDEKQSKADVTVKQKQGAEIIKDRWLKHQNDRSKPQSDDCNLTESERGRMGNGEAWSNWNINRSNIIKEEVSHELHSLQTVGEKDVTTYQGDYTADKIVVSNNVMRRGLERSYTKDKNVVKAKGQENVKLNGSKDFVDGGYDYDNLEVERAAFKTFEEFNGVVSKSHFSHKEMEDKIQRLAKSLNGADINIPEWIFSKMMRSAKIKFNDYSMVRVIQRLAKLGNWKRVIQVTEWLQRRERFKSHKPRHIYTAALDALGKARRPVEALNVFHAMQQQMSTYPDLVAYHSIAVTLGQAGYLKELFDVIDSMRSPPKKKFKVGVLGNWDPRLEPDIIVYNAVLNACVHQKQWEGAFWVLQQLKTQGQHPSATTYGLVMEVMFSCDKYNLVHEFFKKVRKSSIPNSLTYRVLVKTLWKEGKTDEAVLAVQEMERRGIVGSASLYYDLARCLCVAGRCSEALMQIEKISKVANKPLVVTYTGLIQACVESGNIQDGAYIFEKMKDICSPNLVTCNMMLKAYLEHRMFQEAKELFEKMLENANHVRRNSDYKIWAIPDIYTFNTILDACIAQKRWNYFDYVYQKMLYHGYHFNPKRHLRMILEASRAGKEGPIEVTWKHLVQTDRIPPALLIKERFCVKLEKGDHVEALTCITNNVSKDLQAFSKLSWLNLFEANAQRFQKNTLVRLMNEVNYLVSKSSLPVPALEALENLMQSWNEFCITDLSVTDTKQLVNSR 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2225 909 Pfam PPR repeat 429 455 IPR002885 -
Bisa02g2225 909 Pfam PPR repeat 584 613 IPR002885 -
Bisa02g2225 909 Pfam Pentatricopeptide repeat domain 509 558 IPR002885 -
Bisa02g2225 909 Pfam Pentatricopeptide repeat domain 650 696 IPR002885 -
Bisa02g2225 909 MobiDBLite consensus disorder prediction 132 147 - -
Bisa02g2225 909 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 685 715 IPR002885 -
Bisa02g2225 909 MobiDBLite consensus disorder prediction 101 147 - -
Bisa02g2225 909 Gene3D Tetratricopeptide repeat domain 646 797 IPR011990 GO:0005515
Bisa02g2225 909 Coils Coil 350 370 - -
Bisa02g2225 909 NCBIfam pentatricopeptide repeat 429 462 IPR002885 -
Bisa02g2225 909 NCBIfam pentatricopeptide repeat 653 679 IPR002885 -
Bisa02g2225 909 NCBIfam pentatricopeptide repeat 687 715 IPR002885 -
Bisa02g2225 909 Gene3D Tetratricopeptide repeat domain 351 501 IPR011990 GO:0005515
Bisa02g2225 909 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 512 546 IPR002885 -
Bisa02g2225 909 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 581 615 IPR002885 -
Bisa02g2225 909 PANTHER OS01G0674700 PROTEIN 19 896 IPR044645 GO:0009658
Bisa02g2225 909 Gene3D Tetratricopeptide repeat domain 502 645 IPR011990 GO:0005515
Bisa02g2225 909 MobiDBLite consensus disorder prediction 208 227 - -
Bisa02g2225 909 FunFam Pentatricopeptide repeat-containing protein 355 501 - -
Bisa02g2225 909 SUPERFAMILY TPR-like 502 714 IPR011990 GO:0005515
Bisa02g2225 909 MobiDBLite consensus disorder prediction 208 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2225 Bisa-ChrBisa02 52452017 52473026 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2225 514 782 Miscellaneous Gene Families AT4G11690 19.661 6.66e-11 63.9