Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2206 ATGAGCAACATAAGCATGGTGGAGGCGAAGTTGCCACCAGGTTTCAGGTTTCATCCCAGCGATGAAGAGCTTGTCTGCGATTACTTGATGAAGAAGGTCGCACACTCTGATAATTCCTCTCTCATGATTGATCTTGACCTTAACAACTGTGAGCCTTGGGATATTCCAGAAAAAATAAGGATAAGCAAAGCAGAAGATACAAAAGCAATTGAAGAAGCTAAACTTCATGGGGCCTATATGTATGAGGACTGGGTCTTGTGTAGGGCATTCTACAAGAACAAAGAAGAAATTGGGAAAAGTAGCATGGGAATTAGGTGCTACCATGAGGACACTGGCTCTTCCTCTCTTCCTCAACCTCACCTAATGGATTCTTACATCACTTTTGACTTCCCACCTCCTCATCACATCCATCAACACCAGCAAGTGCCCTGCTTCTCCAATAATATTTTCCAAACAAACCCTACAGATAATACTATTACTACTTTCAACCCCATATCCACTATGGACCACTCATTAAGTGCCCCAGAGAATAATACTATTCATGATGCAACCACAACAACAAGCACATATCATTTGGCTTCTTCTAATAGCTATTCCCATTCCTTAGCCTTAGACCCCTTTTCATGTGACACAAAGGTCCTAAAAGCTGTCTTGACTCAGCTCACAAAGATGGAAACAAACCCAGTCTCTCAAAAAGGGTCAGAGGGAGTAATTAGTTATAATAATCATTCTGAGACTTACTTCTCTGAACTGCCTATTCCCAACCTATGGAACAACTATTGA 783 0.4151 MSNISMVEAKLPPGFRFHPSDEELVCDYLMKKVAHSDNSSLMIDLDLNNCEPWDIPEKIRISKAEDTKAIEEAKLHGAYMYEDWVLCRAFYKNKEEIGKSSMGIRCYHEDTGSSSLPQPHLMDSYITFDFPPPHHIHQHQQVPCFSNNIFQTNPTDNTITTFNPISTMDHSLSAPENNTIHDATTTTSTYHLASSNSYSHSLALDPFSCDTKVLKAVLTQLTKMETNPVSQKGSEGVISYNNHSETYFSELPIPNLWNNY 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2206 260 ProSiteProfiles NAC domain profile. 11 149 IPR003441 GO:0003677|GO:0006355
Bisa02g2206 260 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 63 - -
Bisa02g2206 260 Gene3D NAC domain 20 69 IPR036093 GO:0003677|GO:0006355
Bisa02g2206 260 Pfam No apical meristem (NAM) protein 12 60 IPR003441 GO:0003677|GO:0006355
Bisa02g2206 260 SUPERFAMILY NAC domain 2 92 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2206 Bisa-ChrBisa02 51756134 51761347 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2206 2 258 NAC Transcription Factor Family AT1G56010 33.235 1.53e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bisa02g2206 NAM 1.6e-12 No_clan