Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2195 ATGAAGTCTGTGCTTTATCCCACCGGGAAGATTTTCCCTTTTAGATTTCGATGTTGTAGATGTGTAACCTCATTACATCGATGTTTTTGGAACATACCATTTCATCGATGTTTGATTGAACTATTTATCGGAATTTTGGTGAAGTTCACAGTTGATGAGCTTCGACGGATTATGGACCTCAAACACAATATTCGTAATATGTCGGTTATTGCACATGTCGATCATGGAAAATCAACCCTCACAGATTCTCTTGTGGCTGCTGCTGGTATTATTGCACAAGAAATTGCAGGAGATGTCCGGATGACTGATACCCGTCAAGATGAAGCAAAGCGTGGTATCACAATCAAGTCCACTGGCATCTCACTCTACTATGAAATGAGTGATGACGCTCTGAAGAGCTTCAAGGGGGAACGCCAAGGCAATGAGTATCTCATCAATCTCATTGACTCCCCTGGGCACGTTGACTTCTCATCTGAGGTCACAGCTGCACTTCGCATTACTGATGGAGCGTTGGTGGTGGTGGATTGCATTGAGGGTGTGTGTGTCCAGACCGAAACTGTGCTGCGACAAGCACTGGGAGAAAGGATTAGGCCTGTCTTGACCGTGAATAAAATGGACAGATGCTTCCTTGAGCTCCAGGTGGATGGAGAGGAGGCCTACCAGACTTTTCAAAGGGTTATTGAAAATGCTAATGTGATCATGGTCACATATGAAGATCCCCTCCTTGGTGATGTCCAGGTTTACCCAGAGAAAGGAACAGTTGCTTTTTCTGCTGGTTTGCATGGTTGGGCTTTCACTTTGACCAACTTTGCTAAGAAGTATGCCTCAAAATTCGGAGTTGATGAGTCAAAGATGATGGAAAGACTGTGGGGTGAGAATTTCTTTGATCCAACCACCAAAAAATGGACCAAAAAGAATACCGGTTCTCCTACCTGCAAGCGTGGGTTTGTTCAGCTTTGTTATGAGCCTATCAAGCAGATAATTTCACTTTGCATGGATGATCAAAAGGATAAGTTGTGGCCTATGCTGCAAAAGCTTGGAATCACCATGAAATTTGAAGAGGACCTGAAGGGTAAAGCATTGATGAAACGTGTCATGCAAGCCTGGCTTCCAGCAAGTAATGCACTCTTGGAAATGATTATATTCCATCTTCCCTCCCCAGAAAAAGCCCAGAGATATCGTGTTGAGAACTTGTATGAGGGTCCTCTTGATGATCGTTATGCTACAGCAATTAGGAATTGTGATCCTGAAGGACCATTAATGCTCTACGTCTCCAAGATGATTCCTTCATCTGACAAGGGTAGGTTTTTCGCCTTCGGCCGTGTCTTCTCTGGTAGGGTCTCTACTGGTTTGAAGGTTAGAATTATGGGACCAAACTTTGTCCCTGGCGAGAAGAAGGATCTCTATGTTAAAAGTGTGCAAAGAACTGTCATTTGGATGGGAAAGAAGCAAGAAACTGTTGAGGATGTGCCTTGTGGTAACACGGTTGCGATGGTTGGTTTGGACCAATATATTACTAAGAATGCTACTTTAACAAATGAGAAAGAGGTTGATGCACACCCAATTCGGGCTATGAAGTTTTCTGTATCACCTGTGGTAAGTGTTGCTGTTCAGTGCAAGGTTGCATCAGATCTTCCTAAGCTCATTGAAGGCCTTAAACGTTTAGCAAAGTCAGACCCCGTGGTGGTCTGTACTATAGCAGAGTCTGGTGAACATATCATTGCTGCTGCTGGAGAGCTGCATCTTGAAATCTGTCTGAAGGATTTGCAGGAAGATTTTATGGGTGGAGCTGAGATTATAAAATCTGATCCTATAGTGTCCTTCCGAGAGACTGTCCTTGAGAAATCTTGTCATACAGTGATGAGCAAGTCACCGAACAAGCACAACCGTCTGTACATGGAGGCAAGACCCATGGAGGAAGGACTTGCAGAAGCAATTGAAGAAGGTAGGATTGGACCCAGAGATGACCCAAAATCTCGTTCTAGAATCCTGTCTGAGGAGTTTGGATGGGACAAGGACCTTGCCAAGAAAATTTGGAGTTTTGGACCTGAGACTACTGGTCCTAACATAGTTGTAGAAAAGTGCAAGGGGGTGCAGTACTTGAATGAAATCAAGGACTCCGTGGTTGCTGGGTTTCAGATAGCATCAAAAGAAGGTCCAATGGCAGAAGAGAACATGAGAGGAGTTTGCTTTGAAGCACATGATGTTGTTCTTCATGCTGACGCCATCCACAGAGGAGGTGGTCAGATCATTCCAACAGCTAGGAGAGTCTTCTGTGCTGCCATGTTAACAGCAAAACCCAGGCTTCTTGAGCCTGTGTATCTGGTGGAAATACAAGCTCCTGAGCAAGCTCTTGGTGGAATCTACAGTGTTCTTAACCAGAAACGAGGGCATGTCTTTGAGGAAATGCAGAGGCCTAATACCCCACTATACAATGTTAAAGCTTACCTACCTGTGATTGAGTCATTTAAGTTCAGTGAGAGTCTAAGGGCAGCAACCTCAGGCCAAGCTTTCCCACAGTTGATATTTGATCACTGGGATATGATGCCTTCTGATCCATTGGAGCCTGGGTCACAGGCTGCTGTACGTGTTGCTGATATTCGAATGAGGAAAGGCTTAAAGGTTCGAATGACACCTCTCTCTGAGTACGAAGATAGGCTTTGA 2664 0.4456 MKSVLYPTGKIFPFRFRCCRCVTSLHRCFWNIPFHRCLIELFIGILVKFTVDELRRIMDLKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEIAGDVRMTDTRQDEAKRGITIKSTGISLYYEMSDDALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQRVIENANVIMVTYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKKYASKFGVDESKMMERLWGENFFDPTTKKWTKKNTGSPTCKRGFVQLCYEPIKQIISLCMDDQKDKLWPMLQKLGITMKFEEDLKGKALMKRVMQAWLPASNALLEMIIFHLPSPEKAQRYRVENLYEGPLDDRYATAIRNCDPEGPLMLYVSKMIPSSDKGRFFAFGRVFSGRVSTGLKVRIMGPNFVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQYITKNATLTNEKEVDAHPIRAMKFSVSPVVSVAVQCKVASDLPKLIEGLKRLAKSDPVVVCTIAESGEHIIAAAGELHLEICLKDLQEDFMGGAEIIKSDPIVSFRETVLEKSCHTVMSKSPNKHNRLYMEARPMEEGLAEAIEEGRIGPRDDPKSRSRILSEEFGWDKDLAKKIWSFGPETTGPNIVVEKCKGVQYLNEIKDSVVAGFQIASKEGPMAEENMRGVCFEAHDVVLHADAIHRGGGQIIPTARRVFCAAMLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPNTPLYNVKAYLPVIESFKFSESLRAATSGQAFPQLIFDHWDMMPSDPLEPGSQAAVRVADIRMRKGLKVRMTPLSEYEDRL 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2195 887 PRINTS GTP-binding elongation factor signature 66 79 IPR000795 GO:0003924|GO:0005525
Bisa02g2195 887 PRINTS GTP-binding elongation factor signature 146 156 IPR000795 GO:0003924|GO:0005525
Bisa02g2195 887 PRINTS GTP-binding elongation factor signature 110 118 IPR000795 GO:0003924|GO:0005525
Bisa02g2195 887 PRINTS GTP-binding elongation factor signature 162 173 IPR000795 GO:0003924|GO:0005525
Bisa02g2195 887 PRINTS GTP-binding elongation factor signature 198 207 IPR000795 GO:0003924|GO:0005525
Bisa02g2195 887 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 103 118 IPR031157 -
Bisa02g2195 887 Pfam Elongation factor G C-terminus 768 854 IPR000640 -
Bisa02g2195 887 FunFam Translation elongation factor 2 767 887 - -
Bisa02g2195 887 Pfam Elongation Factor G, domain III 531 593 IPR041095 -
Bisa02g2195 887 SUPERFAMILY EF-G C-terminal domain-like 771 882 IPR035647 -
Bisa02g2195 887 SMART EFG_IV_2 650 766 IPR005517 GO:0005525
Bisa02g2195 887 FunFam Translation elongation factor 2 387 528 - -
Bisa02g2195 887 CDD aeEF2_snRNP_like_IV 603 775 - -
Bisa02g2195 887 Gene3D - 48 282 IPR027417 -
Bisa02g2195 887 NCBIfam small GTP-binding protein domain 65 225 IPR005225 GO:0005525
Bisa02g2195 887 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 49 385 IPR027417 -
Bisa02g2195 887 Gene3D Elongation Factor G (Translational Gtpase), domain 3 529 607 - -
Bisa02g2195 887 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 62 388 IPR000795 GO:0003924|GO:0005525
Bisa02g2195 887 Pfam Elongation factor Tu domain 2 438 511 IPR004161 GO:0005525
Bisa02g2195 887 SUPERFAMILY Ribosomal protein S5 domain 2-like 606 770 IPR020568 -
Bisa02g2195 887 SUPERFAMILY EF-G C-terminal domain-like 528 604 IPR035647 -
Bisa02g2195 887 CDD EF2 65 275 - -
Bisa02g2195 887 FunFam Translation elongation factor 2 530 607 - -
Bisa02g2195 887 Gene3D - 613 766 IPR014721 -
Bisa02g2195 887 CDD EF2_II 419 514 - -
Bisa02g2195 887 CDD EF2_snRNP_III 538 603 - -
Bisa02g2195 887 Gene3D - 767 887 - -
Bisa02g2195 887 SMART EFG_C_a 768 857 IPR000640 -
Bisa02g2195 887 Pfam Elongation factor Tu GTP binding domain 62 386 IPR000795 GO:0003924|GO:0005525
Bisa02g2195 887 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 52 885 - -
Bisa02g2195 887 Pfam Elongation factor G, domain IV 654 766 IPR005517 GO:0005525
Bisa02g2195 887 Gene3D Translation factors 387 528 - -
Bisa02g2195 887 FunFam Translation elongation factor 2 48 282 - -
Bisa02g2195 887 FunFam Translation elongation factor 2 613 766 - -
Bisa02g2195 887 CDD eEF2_snRNP_like_C 771 850 - -
Bisa02g2195 887 SUPERFAMILY Translation proteins 387 520 IPR009000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2195 Bisa-ChrBisa02 51456808 51464121 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2195 46 887 Eukaryotic Initiation Factors Gene Family AT1G56070 87.544 0.0 1560