Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2192 ATGGATGACAGCGAACAAGTGAGAAGCATGGATGAGTATTTGGAAGAAGATGAAGAAGCTGAACTTCCAGGGTTTCGGTTCCATCCCACAGATGAAGAACTTGTGAGCTTCTACCTCCGAAGGAAGCTCGACAGAAAACCCATTAGTATCGAACTCATCAAACAGATTGATATCTACAAATACGACCCTTGGGATCTTCCAAGTATGTTTCTACTTAATCTTTCCAGTTTCCACACTCTCCCATCTTGGAGTGATTATAATGAGGTTAATCATGTTAGCCAGTTGAGCCATTCAGTGCAACAGCAGCCTCATCAATATTCAACTCCACCACCACCATCATCTTCATCAGCTATGACGAGCTTCTGGATTAACCAGGCTTCCAGTGATTTGTTTGCTTCTGAGAACTCTTGGGAATGGGATGAGCTTGGTTCAGTCGTGCAGTTTCCTCTTCATTTCGACTCTATGATGTAA 471 0.431 MDDSEQVRSMDEYLEEDEEAELPGFRFHPTDEELVSFYLRRKLDRKPISIELIKQIDIYKYDPWDLPSMFLLNLSSFHTLPSWSDYNEVNHVSQLSHSVQQQPHQYSTPPPPSSSSAMTSFWINQASSDLFASENSWEWDELGSVVQFPLHFDSMM 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2192 156 ProSiteProfiles NAC domain profile. 21 156 IPR003441 GO:0003677|GO:0006355
Bisa02g2192 156 MobiDBLite consensus disorder prediction 1 21 - -
Bisa02g2192 156 SUPERFAMILY NAC domain 21 70 IPR036093 GO:0003677|GO:0006355
Bisa02g2192 156 Pfam No apical meristem (NAM) protein 23 69 IPR003441 GO:0003677|GO:0006355
Bisa02g2192 156 MobiDBLite consensus disorder prediction 97 116 - -
Bisa02g2192 156 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 20 69 - -
Bisa02g2192 156 Gene3D NAC domain 30 122 IPR036093 GO:0003677|GO:0006355
Bisa02g2192 156 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2192 Bisa-ChrBisa02 51430010 51432793 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2192 18 71 NAC Transcription Factor Family AT1G26870 72.222 4.67e-23 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bisa02g2192 NAM 7.7e-14 No_clan