LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa02g2181	ATGGGGAATCGTGTTCTAAAGGATTTTGACATAAAAAAGGAAGCTGGGGCCTCATTTAAAGCTGTCCAGAAGGAATTTCGGGTTCCTGTGTCAGAAAACTATGTCGAGATCCATTTCTTTTGGGCTGGAAAAGGGACTTGCTGTGTTCCAGCTCAAGATTTTACACCCACTGTCAGTAACAAACCCCCAACCAGCAAAAAGAGCAGGACCGGTCTAATTGTGGGCATTGTTGTTGGTATTGGAGTTGTAGGCCTTTTGTCTGTTCCTGTGGTTTTCTATATAATTCAAAGAAGAAAGCATCATGGAGATGGTGAAGAAGATCTTTTAGGTATTGATACAAAGCCATACACTTTCAGCTATTCTGAATTAAAGAATGCCACAAATGACTTCAATCCTGACAACAAGCTCAGAGAGGGAGGTTTTGGGCCTGTGTATAAGGGGACACTTAATGATGGGAGAGTAATTGCAGTAAAACAACTCTCTCTAGGATCTCATCAAGGAAGGAGCCAGTTCATAACTGAGATTGCTACTATATCTGCTGTGCAACACCGCAATCTAGTTAAATTATATGGATGTTGCATTGAAGGAAATAAAAGACTTCTTGTCTATGAGTATCTAGAAAACAAGAGTCTTGATCAAGCCTTATTTGGAAATTGCCTAGCCCTCAAATGGTCTACACGATATGATATCTGCTTGGGCGTAGCGAGAGGTTTGGCTTATCTTCATGAAGAGTCACGGCTCCGTATTGTACATCGTGATGTAAAAGTTAGTAATATTCTGCTTGATCATCAGCTTGTTCCTAAAATATCTGATTTTGGTTTAGCCAAATTATATGATGACAAAAAAACTCATATAAGCACCCGAGTAGCTGGGACAATTGGATATCTCGCTCTGGAGTATGCCATGCGTGGACATCTTACTGAGAAAGCAGATGTGTTTTCCTTTGGTGTTGTGGCCCTTGAGATAGTTAGTGGGAGGCCAAATTCTGGTTCAAACTTGGAAGGGGGGAAGATGTATCTTCTAGAATGGGCTTGGCAGCTGCATGAAAACAGATGTGTACTTGAACTTGTAGATCCAAGACTATCATCAGATTTCAATGAGGAGGAAGTTAAAAGAATTGTAGGAATATCACTTCTGTGCACTCAAACATCACCATTGTCAAGGCCATCGATGTCCCGTGTGGTGGCAATGCTCTCTGGAGATATCGAAGTGAGCACTGTAACTTCAAGGCCCGGATATTTGACTGACTGGAAATTTGATGATGTGAGTCATGTGACAAGCATCATGACTGACTTGGCTACAAAAGGATCTGATACAAGTCAGTATAACTCCTTAGCAAGTACTAGCATAGTTGGTTATTCAAACCAATCTCCTGTAGGTGCTTCTAAACCTATCCTTCATGACACTCTTAGTGAAGGTAGGTAA	1425	0.4119	MGNRVLKDFDIKKEAGASFKAVQKEFRVPVSENYVEIHFFWAGKGTCCVPAQDFTPTVSNKPPTSKKSRTGLIVGIVVGIGVVGLLSVPVVFYIIQRRKHHGDGEEDLLGIDTKPYTFSYSELKNATNDFNPDNKLREGGFGPVYKGTLNDGRVIAVKQLSLGSHQGRSQFITEIATISAVQHRNLVKLYGCCIEGNKRLLVYEYLENKSLDQALFGNCLALKWSTRYDICLGVARGLAYLHEESRLRIVHRDVKVSNILLDHQLVPKISDFGLAKLYDDKKTHISTRVAGTIGYLALEYAMRGHLTEKADVFSFGVVALEIVSGRPNSGSNLEGGKMYLLEWAWQLHENRCVLELVDPRLSSDFNEEEVKRIVGISLLCTQTSPLSRPSMSRVVAMLSGDIEVSTVTSRPGYLTDWKFDDVSHVTSIMTDLATKGSDTSQYNSLASTSIVGYSNQSPVGASKPILHDTLSEGR	474

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa02g2181	474	Gene3D	Transferase(Phosphotransferase) domain 1	206	409	-	-
	Bisa02g2181	474	FunFam	Putative LRR receptor-like serine/threonine-protein kinase	206	410	-	-
	Bisa02g2181	474	Gene3D	Phosphorylase Kinase; domain 1	94	205	-	-
	Bisa02g2181	474	CDD	STKc_IRAK	138	398	-	-
	Bisa02g2181	474	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	249	261	IPR008271	GO:0004672\|GO:0006468
	Bisa02g2181	474	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED	2	429	-	-
	Bisa02g2181	474	Gene3D	-	1	56	-	-
	Bisa02g2181	474	Pfam	Malectin domain	2	52	IPR021720	-
	Bisa02g2181	474	ProSiteProfiles	Protein kinase domain profile.	130	404	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bisa02g2181	474	FunFam	Leucine-rich repeat receptor-like protein kinase	99	205	-	-
	Bisa02g2181	474	Pfam	Protein tyrosine and serine/threonine kinase	133	398	IPR001245	GO:0004672\|GO:0006468
	Bisa02g2181	474	SMART	serkin_6	130	398	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bisa02g2181	474	SUPERFAMILY	Protein kinase-like (PK-like)	113	417	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa02g2181	Bisa-ChrBisa02	50974235	50977990	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa02g2181	2	474	Receptor kinase-like Gene Family	AT1G56120	62.933	0.0	605

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Bisa02g2181		PK_Tyr_Ser-Thr	1.1e-45	CL0016