Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2171 ATGATCTATCGATCAAAACTTATGGCTTCTTCTTCTTCGTTTTCTTCTTCAACCTTGCCTATTGCAATTGCCGCAGTTTTTGTGTTCTTCAGCTGCTTAGTTGAGGTGGCACAAGCTCAATCTTCAAATGCTACTACAGATTCCTATGAAGTGAGAACTTTGAAATCAATCCTCAACCAGAGGGTTGAATTGGATGTTGTTGGGGAAATCCCAAAAGAGCTGTGGACTCTGACTCACCTCATCGATTTTGTGCTCAAGTTTGTTCGAACTGCAATTAGGAAACTTGGCAACAATTACTTGACGGGTTCTCTCCCTCCAGCCATTGGAAATCTAACTCGCTTGCAATTCTTGAGCTTTGGCCACAATTCCTTATCAGGGGAGCTTCCGAAGGAATTGGGAAATCTTACGGAGTTACAAATATTGTCTCTGGGGACTAACAACTTCTCCGGTTCTCTCCCGTCTGAAATAGGGAACCTGGTGAAATTAGAACAGCTTGGTTTGCCTTCTGGACTCAACTGTTTGCAAAGAAATTTTACCTGCAATGGTGGTACTAGAATACATTATGACTTTGCAATCAAATGTGGCGGTCCTCAAATTACATCAAATGGAATTACGTATGAAAATGATAATGAGACACTTGGCCCTGCAACTTATTTTGTTTCTAATTCAAAGAGATGGGCAGTTAGCAATGGGAATCCTGTTCTAAAAGATTTTGACATAAAAAAGGAAGCTGGGGGATCATTTAGAACTGTCCCAAAGAAATTCCGGGTTCCTGTGTTAGAAAACTATCTGGAGATCCATCTCTTTTGGGCTGGAAAAGGGACTTGCTGTGATCCAGTTTACGATACTTATGGCCCTCTGATATCATCAATTAGTGTTACCCCAGACAAACCCCCAACCAGTAAAAAGAGCAAGACCGGTCTGATTGTGGGAATTGTTGTTGGTATCGGAGTTGTAAGCCTTCTGTCTGTTCTTGTGGTTTTCTATATAATTCAAAGAAGAAAGCATCATGGAGATGGTGATGAAGAGCTTTTAGGTATCGATATAAAGCTATACACTTTCAGCTATTCTGAATTAAAGAATTCCACAGATGACTTCAATCCTGACAACAAGCTTGGAGAGGGAGGTTTTGGGCCCGTGTATAAGGGGACACTTAATGATGGAAGAGTAATTGCAGTAAAACAACTCTCTCTGAAATCCCATCAAGGAAAGAGCCAGTTCATAACTGAGATTGCTACTATATCTGCTGTGCAACACCGCAATCTTGTTAAATTATATGGATGTTGCATTAAAGGAAATAAAAGACTTCTTGTCTATGAGTATCTAGAAAACAAGAGTCTTGATCAAGCATTATTTGGAAATTGCCTAGACCTCAAATGGTCTACACGCTATGATATCTGTTTGGGCATAGCGAGAGGCTTGGCTTATCTTCATGAAGAGTCAAGGCTCCGAATTGTACACCGTGATGTGAAATCTAGTAATATTTTGCTTGATCATGAGCTTGTTCCTAAAATATCTGATTTTGGTTTGGCCAAATTATATGATGACAAAAAAACCCATATAAGCACCCGAGTGGCTGGGACATTTGGATATCTGGCTCCGGAGTATGCCATGCGTGGACATCTTACTGAGAAAGTAGATGTGTTTTCCTTTGGTGTTGTGGCTCTTGAGATAGTTAGTGGGAGGCCAAATTCAGCTCCAAACTTGGAAGGGGAGAAGATGTACCTTCTTGAATGGGCTTGGCAGCTGCATGAAAACAGATGTGTACTTGAACTTGTAGATCCAAGACTATTATCAGATTTCAATGAGGAAGAAGTTAAAAGAATTGTAGGGATATCACTGTTGTGCACTCAAACATCACCATTGTCAAGGCCATCGATGTCCCGCGTGGTGGCAATGCTTTCCGGAGATATCGAAGTGAGCACTGTAACTTCGAGGCCCGGATACTTGGCTGACTGGAAATTTGATGATGTGACAAGCATCATGACTGGCTTTGCTACAAAAGGATCTGATATTAGTCACAATAACTCCTCATCAAGTACGAGCATAGCTGGTTCTTCTAAACATATCCTTAATGACACTCTTAGTGAAGATTGA 2097 0.4096 MIYRSKLMASSSSFSSSTLPIAIAAVFVFFSCLVEVAQAQSSNATTDSYEVRTLKSILNQRVELDVVGEIPKELWTLTHLIDFVLKFVRTAIRKLGNNYLTGSLPPAIGNLTRLQFLSFGHNSLSGELPKELGNLTELQILSLGTNNFSGSLPSEIGNLVKLEQLGLPSGLNCLQRNFTCNGGTRIHYDFAIKCGGPQITSNGITYENDNETLGPATYFVSNSKRWAVSNGNPVLKDFDIKKEAGGSFRTVPKKFRVPVLENYLEIHLFWAGKGTCCDPVYDTYGPLISSISVTPDKPPTSKKSKTGLIVGIVVGIGVVSLLSVLVVFYIIQRRKHHGDGDEELLGIDIKLYTFSYSELKNSTDDFNPDNKLGEGGFGPVYKGTLNDGRVIAVKQLSLKSHQGKSQFITEIATISAVQHRNLVKLYGCCIKGNKRLLVYEYLENKSLDQALFGNCLDLKWSTRYDICLGIARGLAYLHEESRLRIVHRDVKSSNILLDHELVPKISDFGLAKLYDDKKTHISTRVAGTFGYLAPEYAMRGHLTEKVDVFSFGVVALEIVSGRPNSAPNLEGEKMYLLEWAWQLHENRCVLELVDPRLLSDFNEEEVKRIVGISLLCTQTSPLSRPSMSRVVAMLSGDIEVSTVTSRPGYLADWKFDDVTSIMTGFATKGSDISHNNSSSSTSIAGSSKHILNDTLSED 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2171 698 Gene3D Transferase(Phosphotransferase) domain 1 442 645 - -
Bisa02g2171 698 ProSitePatterns Serine/Threonine protein kinases active-site signature. 485 497 IPR008271 GO:0004672|GO:0006468
Bisa02g2171 698 SMART serkin_6 366 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g2171 698 CDD STKc_IRAK 372 634 - -
Bisa02g2171 698 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 32 - -
Bisa02g2171 698 Gene3D Ribonuclease Inhibitor 58 180 IPR032675 -
Bisa02g2171 698 Gene3D Phosphorylase Kinase; domain 1 341 441 - -
Bisa02g2171 698 Pfam Malectin domain 230 291 IPR021720 -
Bisa02g2171 698 FunFam Leucine-rich repeat receptor-like protein kinase 335 441 - -
Bisa02g2171 698 ProSiteProfiles Protein kinase domain profile. 366 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g2171 698 FunFam Putative LRR receptor-like serine/threonine-protein kinase 442 646 - -
Bisa02g2171 698 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 212 676 - -
Bisa02g2171 698 FunFam Leucine-rich repeat receptor protein kinase EMS1 89 178 - -
Bisa02g2171 698 SUPERFAMILY Protein kinase-like (PK-like) 349 659 IPR011009 -
Bisa02g2171 698 Gene3D - 227 296 - -
Bisa02g2171 698 Pfam Protein tyrosine and serine/threonine kinase 369 634 IPR001245 GO:0004672|GO:0006468
Bisa02g2171 698 SUPERFAMILY L domain-like 68 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2171 Bisa-ChrBisa02 50299529 50314143 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2171 231 673 Receptor kinase-like Gene Family AT1G56120 65.342 0.0 602
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bisa02g2171 PK_Tyr_Ser-Thr 7.2e-47 CL0016