Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2167 ATGGGGAAGGGAAGAGCACCATGCTGTGATAAGAGTAAAGTGAAGAGAGGACCTTGGAGCCCAGAAGAAGACCTTAAGCTCATAACCTTTATCCACAAACATGGCCATGAAAACTGGAGAGCTCTTCCTAAACTTGCAGGGCTTGTACGATGTGGAAAAAGTTGTCGTTTGAGATGGATCAATTACTTGAAACCTGATGTGAAAAGGGGCAATTTTACTAAAGAAGAAGAGGAAACCATAATGAGGCTACATGAGGCTTTAGGAAACAAGTGGTCAAAGATTGCATCCCACTTGCCTGGTAGAACAGATAATGAGATAAAAAATGTGTGGAACACCCACTTGAAGAAAAGATTAAAGCCCAAGTTATCATCACCCTCTAACATAGCATATGAATCATCCGTCACAACTTTGTCCTCTGATTCATTTTCCTCCGAGAAAATTGAGCAAGATTCAGAAAATCAAGTCTCCGACGAAGCAATTAATGGAATCATCACAGAGCATCCAAAAGAGTCACCAGCTTCATTTTCTTCCTCTGATAATTCAAATATCTCAAAACCAGAACAAGTTACGGATCCTCTGTTTGACAATTTGCTAGAAGATGATAATCATCTGCTCGAAATACCGATTGATTCATCAGATTATGATATTTGGGACGTTCTAGATAACTCAGAATCCTTCCAGTCAAATGATGTCCAAACCTCAGATGATCTAAGACACGAGATGAATGTTGCTGAAGAGAAGAAATGGTTCCATGAATTGGAGAATGAGCTTGGATTAGGAGCAACAGAGGAATTAATCCAGGATAAGTTCTTACTGAATACTGACGATGCAGACATAGCTTTTCTTGAATCATCGTGGCCTTCTTGGCCTGAAATTTCTGGCTTTTAG 888 0.3986 MGKGRAPCCDKSKVKRGPWSPEEDLKLITFIHKHGHENWRALPKLAGLVRCGKSCRLRWINYLKPDVKRGNFTKEEEETIMRLHEALGNKWSKIASHLPGRTDNEIKNVWNTHLKKRLKPKLSSPSNIAYESSVTTLSSDSFSSEKIEQDSENQVSDEAINGIITEHPKESPASFSSSDNSNISKPEQVTDPLFDNLLEDDNHLLEIPIDSSDYDIWDVLDNSESFQSNDVQTSDDLRHEMNVAEEKKWFHELENELGLGATEELIQDKFLLNTDDADIAFLESSWPSWPEISGF 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2167 295 Gene3D - 70 140 - -
Bisa02g2167 295 Gene3D - 15 68 - -
Bisa02g2167 295 MobiDBLite consensus disorder prediction 166 188 - -
Bisa02g2167 295 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Bisa02g2167 295 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Bisa02g2167 295 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Bisa02g2167 295 Pfam Myb-like DNA-binding domain 69 114 IPR001005 -
Bisa02g2167 295 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
Bisa02g2167 295 CDD SANT 71 114 IPR001005 -
Bisa02g2167 295 FunFam Transcription factor RAX3 9 69 - -
Bisa02g2167 295 SUPERFAMILY Homeodomain-like 14 110 IPR009057 -
Bisa02g2167 295 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Bisa02g2167 295 CDD SANT 18 63 IPR001005 -
Bisa02g2167 295 SMART sant 68 116 IPR001005 -
Bisa02g2167 295 SMART sant 15 65 IPR001005 -
Bisa02g2167 295 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 4 230 - -
Bisa02g2167 295 MobiDBLite consensus disorder prediction 170 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2167 Bisa-ChrBisa02 50078385 50082084 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2167 1 259 MYB Transcription Factor Family AT1G79180 47.910 9.68e-78 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa02g2167 Myb_DNA-binding 4.6e-15 CL0123