Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2166 ATGGATGTTTCATTCTTAAGCTCAACTCTAACCATTCCCAAAAACTCCTTCCGTTGCCTTTCTCCATTCTCAAAAAAAGGGCAAAAATTTCCTCACTTTGTTTTGTGCCGAGTGAGACCACTAGCTAATGAGGTTGGAGACACCGCCATTGATGACACTGAGAACTTCTACAAGATCTTATCTCTGAGTTCCAAGAGTGCAACTATGGAGGAGATAAAGAAAGCTTACCGGTCGATGGCACTCCGGTACCACCCTGACGTGTGTCGAGATCCTTCAAAGAAGGAGGAGTATATGAGGATGTTTATACAGGTCCACACAGCTTATAAAACACTTTCGAACCCTGTGCTTCGGGAGCAATATGATTATGAACTCGGTTTGGTCACCAGCAGGAGAAGAAGGTGGGAAGAACAAATGATTGAGTTGAAGAGAAGGTCTTGTGAAAGAATGGCTCAAAGGGAGGGATATAATTCATCATGGGGCAGTAGAATGAGGGCTCAAAATATGGAAGATCATAATTGA 519 0.4316 MDVSFLSSTLTIPKNSFRCLSPFSKKGQKFPHFVLCRVRPLANEVGDTAIDDTENFYKILSLSSKSATMEEIKKAYRSMALRYHPDVCRDPSKKEEYMRMFIQVHTAYKTLSNPVLREQYDYELGLVTSRRRRWEEQMIELKRRSCERMAQREGYNSSWGSRMRAQNMEDHN 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2166 172 CDD DnaJ 55 113 IPR001623 -
Bisa02g2166 172 SUPERFAMILY Chaperone J-domain 50 124 IPR036869 -
Bisa02g2166 172 Gene3D DnaJ domain 42 150 IPR036869 -
Bisa02g2166 172 SMART dnaj_3 54 116 IPR001623 -
Bisa02g2166 172 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 27 170 - -
Bisa02g2166 172 PRINTS DnaJ domain signature 58 76 IPR001623 -
Bisa02g2166 172 PRINTS DnaJ domain signature 76 91 IPR001623 -
Bisa02g2166 172 PRINTS DnaJ domain signature 96 116 IPR001623 -
Bisa02g2166 172 Pfam DnaJ domain 55 121 IPR001623 -
Bisa02g2166 172 ProSiteProfiles dnaJ domain profile. 55 124 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2166 Bisa-ChrBisa02 49996026 49996544 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2166 34 130 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.000 9.62e-08 48.9