Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2162 ATGTCAGGACGCAAAGGCCGTATCCACAGGACTAATGGGAATGGCAAGAAGCCGCAGGGGGTGGCAACTGAGATGGTGGATTGGAAGATGTCGGTGTCATGGAGCTTTTTAATTCGGGTGAAAAGAGTTTTGTCTGTGGCTAAGATGGCTCTAACAACGTACTTCAACTGGGGAAGGGGTCTTCAAGCTGATGTGAACCTAGAAATGAGTGTCTTCCATGAATCAATAACAGCAGAGGAAGAGGTAGTACTAGCACCACATTATAACCACCACCTCCATGACCATCCTAATTATTGTTATAATAATTCACATGAAAAATACTGCTTTATTGATCCAAACGCCTCCTATGATCTTGACCCAAACATTAGCAGAAATATTGTCCATCCTCATGATCATCACCTTCTTCCCTGTGAAGACTATTATTATTACAATGACCTCTTTCCATGCCCAAAACGCCAAAAGTACTTGGCCTATGATCAGAGTGCCATGGACCTTATCACACCTACCAATAATTATATGTTTGATGGGACTAATGAGGCGACTGTTGCAGAGTTTTATCATGGAGTTCCAGCACTTAATAGTATTTCAGAGGAAAATGGTAGGGATGATGGACGGAGAAAAACGGAGAAGACGGTGTCGGCGCAGAGCAAGGCTGCGAGGGAACGGAGGAGAAAGATAACGGAGAAGACACAGGAGTTAGGGAGGCTTGTTCCTGGTGGCTCAAAGATGAACACAGCTCACATGCTTCATGCTGCTGCTAAGTATCTCACTTTCTTGAAAGCCCAACTTGGGATGCTTCAACTTATTCATACACTCCACGAAGATAAGTCATTCACTGCAACTGAAGATCTACAGAAGCTGCTTACTTCTCCTTTTGTTGAAGAGAAGATGTACCTAGAGGAAAAGTGCTTTGTTCCAAAAGAGTTTGTGGCCACTTTGACAAATCACCAAGATGTTCAATCGAGACCGTCCATCCTTAAAGATCTTGATAAGTTGATTGGGACAGAGACACACATGGAGAAGAAAGAACAACTATAG 1038 0.4335 MSGRKGRIHRTNGNGKKPQGVATEMVDWKMSVSWSFLIRVKRVLSVAKMALTTYFNWGRGLQADVNLEMSVFHESITAEEEVVLAPHYNHHLHDHPNYCYNNSHEKYCFIDPNASYDLDPNISRNIVHPHDHHLLPCEDYYYYNDLFPCPKRQKYLAYDQSAMDLITPTNNYMFDGTNEATVAEFYHGVPALNSISEENGRDDGRRKTEKTVSAQSKAARERRRKITEKTQELGRLVPGGSKMNTAHMLHAAAKYLTFLKAQLGMLQLIHTLHEDKSFTATEDLQKLLTSPFVEEKMYLEEKCFVPKEFVATLTNHQDVQSRPSILKDLDKLIGTETHMEKKEQL 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2162 345 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 201 306 IPR045843 GO:0003700|GO:0006355
Bisa02g2162 345 SMART finulus 216 265 IPR011598 GO:0046983
Bisa02g2162 345 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 210 259 IPR011598 GO:0046983
Bisa02g2162 345 MobiDBLite consensus disorder prediction 1 20 - -
Bisa02g2162 345 Pfam Helix-loop-helix DNA-binding domain 215 259 IPR011598 GO:0046983
Bisa02g2162 345 MobiDBLite consensus disorder prediction 198 224 - -
Bisa02g2162 345 MobiDBLite consensus disorder prediction 196 224 - -
Bisa02g2162 345 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 210 270 IPR036638 GO:0046983
Bisa02g2162 345 Gene3D - 207 280 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2162 Bisa-ChrBisa02 49931715 49939263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2162 129 335 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G30670 37.443 3.30e-30 114