Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2161 ATGGCTTCTTCAACACAATCTGTTTCTAAGGATGAGCCAGTTGTTTCTGTGGATTGGCTATATGCTAACCTTAAAGAGCCTGATATGAAGGTGCTGGATGCATCCTGGTACATGCCGGATGAGCAGAGGAACCCAATTGAAGAATATAAGGTTGCTCACATTCCTGGGGCCCTCTTCTTTGACATAGATGGAATAGCAGATCGAACTACTGACTTGCCTCATATGTTGCCATCGGAGAAAGCTTTCGCTGCAGCTGTTGCCACCCTAGGTATAGGGAACAAAGATATAGTGGTTGTTTATGATGGCAAAGGACTATTTAGTGCAGCTCGTGTCTGGTGGATGTTCAGAGTGTTTGGGCATGACAGAGTTTGGGTATTAGATGGTGGACTGCCAAGATGGCGTGCATCAGGATATGGTATTGAATCTAGTGCTTCTAGTGATGCTTTATTAAAAGCCAGTGCTGCAACTGAGTCAATAGAGAAAGTATATCAAGGACAGTCAGTTGGCCCAATCACATTTCAGACTAAATTTCAGCCACATCTTGTTTGGTCTCTTGGGCAGGTAAAGAAAAACATTGCAGAAAAAAGATACCAACACATAGATGCACGATCAAAGCCCAGGTTTTATGGAGCTGCACCAGAACCCCGAAAGGGGATCAGAAGTGGTCATATACCTGGCAGCAAGTGCATTCCTTTTTTCCAGTTGCTGGATGCTTCACAGAGGTTGTTACCCGCGGATGAACTTAAGAAGCGATTTGATGAAGAAGGCATCTCTTTGGATGGCCCAATTGTGACTTCATGTGGCACTGGTGTAACTGCTTGCATTCTTGTATTGGGCCTCCATCGCCTTGGGAATTCTAATGTTGTACTCTATGATGGATCTTGGACTGAATGGGCTTTACAATCTGATACAACTATTGAAACTTCATGA 930 0.4409 MASSTQSVSKDEPVVSVDWLYANLKEPDMKVLDASWYMPDEQRNPIEEYKVAHIPGALFFDIDGIADRTTDLPHMLPSEKAFAAAVATLGIGNKDIVVVYDGKGLFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYGIESSASSDALLKASAATESIEKVYQGQSVGPITFQTKFQPHLVWSLGQVKKNIAEKRYQHIDARSKPRFYGAAPEPRKGIRSGHIPGSKCIPFFQLLDASQRLLPADELKKRFDEEGISLDGPIVTSCGTGVTACILVLGLHRLGNSNVVLYDGSWTEWALQSDTTIETS 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2161 309 SMART rhod_4 15 139 IPR001763 -
Bisa02g2161 309 SMART rhod_4 183 304 IPR001763 -
Bisa02g2161 309 Gene3D - 178 308 IPR036873 -
Bisa02g2161 309 CDD TST_Repeat_1 14 137 - -
Bisa02g2161 309 ProSiteProfiles Rhodanese domain profile. 25 142 IPR001763 -
Bisa02g2161 309 FunFam Sulfurtransferase 7 149 - -
Bisa02g2161 309 Gene3D - 7 149 IPR036873 -
Bisa02g2161 309 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 187 308 IPR036873 -
Bisa02g2161 309 PANTHER THIOSULFATE SULFERTANSFERASE 9 308 IPR045078 GO:0016783
Bisa02g2161 309 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 12 144 IPR036873 -
Bisa02g2161 309 ProSitePatterns Rhodanese signature 1. 49 60 IPR001307 GO:0004792
Bisa02g2161 309 Pfam Rhodanese-like domain 185 300 IPR001763 -
Bisa02g2161 309 Pfam Rhodanese-like domain 16 135 IPR001763 -
Bisa02g2161 309 CDD TST_Repeat_2 187 299 - -
Bisa02g2161 309 FunFam Sulfurtransferase 178 309 - -
Bisa02g2161 309 ProSitePatterns Rhodanese C-terminal signature. 288 298 IPR001307 GO:0004792
Bisa02g2161 309 ProSiteProfiles Rhodanese domain profile. 193 307 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2161 Bisa-ChrBisa02 49921688 49929983 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2161 4 308 Sulfurtransferasese or Rhodanese AT1G79230 77.049 0.0 509