Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2148 ATGAACTTCACCGCCAAAAAGCACTTCCCTAGCGTCATCTTCACCTTGCTTCTACAAAACTCCAGAGTCCAGATCCCAGCCGTTCTTTCGCCCGAAGGAAAGTACTTCTACTTTTACAGAAGCCGTTGCCTACCTTTTTCGTCGTCGTCTAGGGTTTCTGCTTCAGCTACCACAATGGCCGCTTCTTCTTTGATGAGATCTGCGCTGCTCTCTCCCTCACCTTCTGATCACTTCAAGGTGTCGTGCAATGTCTCAAGCAGCAATCTAAAATCTTTGAAGTCACAGTCTAGCATGTTTGGAACTACCCTTCCAAGGGAATCATTAGTCTTACAAAACTGCAATGCCAGGAGTAGCCGGCCTACCACAGCCACAGCAACTGAAATTCCTCTCCCTGTACAGAAATCAAGGAGCAGTGGGAAGACCAGAGTTGGAATTAATGGTTTTGGTAGAATTGGAAGGTTGGTGTTACGTGTAGCTACATCCAGGGATGATATTGATGTTATAGCACTTAATGATCCTTTTATTGATGCTAAATATATGGCTTACATGTTTAAGTACGATTCTACTCATGGACCATTCAAAGGAACCATTAAGGTTTTGGCTGATTCTACCCTGGAGATTAATGGGAAGCAGATTAAAGTTTTGACCAAAAGAAACCCTGCAGAGATACCATGGGGTGAGTATGGGGCTGATTATGTTATTGAGTCTTCAGGAGTTTTCACGACAGTGGAGAGAGCTTCAGCACATCTGAAGGGTGGTGCCAAGAAAGTTGTAATCTCAGCTCCATCTGCTGATGCACCAATGTTTGTGGTTGGAGTAAATGAGAAGACATACAAACCAAACATGGACATTGTTTCTAATGCAAGCTGTACAACAAATTGCCTTGCTCCTCTTGCCAAGGTCGTTCATGAGGAGTTTGGTATAGTCGAAGGTTTGATGACAACTGTACATGCAACAACAGCAACACAAAAGACTGTAGATGGCCCTTCAATGAAGGATTGGCGAGGGGGACGAGGAGCTGGTCAAAACATAATTCCTAGTTCAACTGGGGCTGCTAAGGCTGTTGGGAAAGTTCTTCCTGACCTTAATGGTAAGCTCACTGGAATGGCATTCCGTGTTCCTACTCCCAATGTTTCTGTTGTGGACTTAACATGTCGACTTCAAAAGAGTGCTTCCTATGAAGATGTCAAAGCAGCGATAAAATATGCCTCAGAGGGACCACTAAAAGGCATTCTTGGATACACAGACGACGATGTTGTCTCTAATGACTTTGTTGGCGATTCAAGGTCAAGTATTTTTGATGCTAAGGCTGGGATTGGGCTTAGTGCATCTTTCATGAAGCTAGTTTCATGGTACGACAACGAATGGGGATACAGCAACCGAGTGTTGGACCTTGTAGAGCACATGGCATTCGTAGGAGCTCGCAATTAA 1431 0.4437 MNFTAKKHFPSVIFTLLLQNSRVQIPAVLSPEGKYFYFYRSRCLPFSSSSRVSASATTMAASSLMRSALLSPSPSDHFKVSCNVSSSNLKSLKSQSSMFGTTLPRESLVLQNCNARSSRPTTATATEIPLPVQKSRSSGKTRVGINGFGRIGRLVLRVATSRDDIDVIALNDPFIDAKYMAYMFKYDSTHGPFKGTIKVLADSTLEINGKQIKVLTKRNPAEIPWGEYGADYVIESSGVFTTVERASAHLKGGAKKVVISAPSADAPMFVVGVNEKTYKPNMDIVSNASCTTNCLAPLAKVVHEEFGIVEGLMTTVHATTATQKTVDGPSMKDWRGGRGAGQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNVSVVDLTCRLQKSASYEDVKAAIKYASEGPLKGILGYTDDDVVSNDFVGDSRSSIFDAKAGIGLSASFMKLVSWYDNEWGYSNRVLDLVEHMAFVGARN 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2148 476 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 368 385 IPR020831 GO:0016620
Bisa02g2148 476 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 408 423 IPR020831 GO:0016620
Bisa02g2148 476 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 249 262 IPR020831 GO:0016620
Bisa02g2148 476 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 284 302 IPR020831 GO:0016620
Bisa02g2148 476 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 311 327 IPR020831 GO:0016620
Bisa02g2148 476 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 289 452 - -
Bisa02g2148 476 Gene3D - 142 469 - -
Bisa02g2148 476 PANTHER GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE 140 470 IPR020831 GO:0016620
Bisa02g2148 476 ProSitePatterns Glyceraldehyde 3-phosphate dehydrogenase active site. 288 295 IPR020830 GO:0016620
Bisa02g2148 476 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 141 310 IPR036291 -
Bisa02g2148 476 FunFam Glyceraldehyde-3-phosphate dehydrogenase 141 300 - -
Bisa02g2148 476 SMART gp_dh_n_7 141 290 IPR020828 GO:0051287
Bisa02g2148 476 Pfam Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 295 452 IPR020829 GO:0016620
Bisa02g2148 476 NCBIfam glyceraldehyde-3-phosphate dehydrogenase, type I 142 464 IPR006424 GO:0006006|GO:0016620|GO:0050661|GO:0051287
Bisa02g2148 476 Gene3D Dihydrodipicolinate Reductase; domain 2 290 456 - -
Bisa02g2148 476 FunFam Glyceraldehyde-3-phosphate dehydrogenase 289 454 - -
Bisa02g2148 476 Pfam Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 142 242 IPR020828 GO:0051287
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2148 Bisa-ChrBisa02 49422242 49431081 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa02g2148 02 49422242 49431081 Bisa02g2148 02 49422242 49431081 ECH