Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2133 ATGGTAGGCGAAGAAACCAAACCATATTCTCAAGTCTTAAGAATGGCCGACTGTAAAATTTGTGTCCTTGCAATTCCAACTACTTGCTTGGTTTTGTGGGCAGCTTGTGAGGGCACTTTAGGACTCACTCAAGAAGCTGAGGCTTTACTCATCTGGAAACAAAGTCTCCCCCACCAACCAATTCTGGAGTCATGGGTCTCTCTTCCATCCACCACCAACTCCACTACAGGTCAAGCCCCATGTTCATGGCATGGAATTAAGTGTGACTCCTCAGCCAACGTCATTGAACTAAACTTGAATCGTACTGGTCTTCAAGGTACCCTTCAAAAATTCAACTTCTCTGCATTCTCTAACCTTCTTCTTCTTAATCTCAAATTCAATGAGCTCACCGGCACCATACCGGAAACCATAGGGTTGCTCTCAAAACTCCAATTCCTTGACCTTAATCGTAACCATTTCAATGGCACCATTCCTCTTTCTCTTGCAAATCTTACTCAACTTTATGAGCTTGATCTTTCAGAAAACGATCTCATTGGAATATTAGACCCTCGCCTATTCCCTGATGGTAGTGATCAACCGAAAACTGGTCTCATTGGGATAAAAAATCTCCTATTCCAGGACACCTTGCTTGGTGGTACAATTCCAAATGAAATAGGGAATATAAGAAATTTGACTATTCTGCGACTAGATGGGAATAGCTTCTATGGTCCTATTCCTACATCACTAGGCAACTGTACACACCTAAGCATTCTTTCAATGTCTAAAAATTCTCTCTCAGGCATAATTCCCCCCAATTTTGGTAGGTTGACCAATTTAACTGATATTCGCTTCCATTTCAACAATTTACACGGTGAAGTACCGCAAGAATTTGGAAACCTTTCTTCTTTAACTATCCTTCTTCTTTCTCGCAACAACTTCACTGGACACTTGCCACCACAAGTTTGCAAAGCTGAGCTTGCATACACAATGGCAGTGACTGAAAAATGTGATGTGTATAGCTTTGGTGTTTTGGCTTTTGAAGTGTTGATGGGAAAGCATCCTAGCAATCTAATTTCTCAGATACAAAATGGTGGTGCTCAAAAAATCAACCTTAAAGAGATTTTAGACCCTCGTTTGTCACCTACGAAGCAACAAAATCCAGAGGAATTGGTTTTGATTGGGAATCTAGCTCTTTCATGTTTACAAACAAACCCTCAATCTCGACCCACCATGCGAAACATAGCTCAAATGATTGAAATGGAGACAACTCATTACTCTTGA 1260 0.4095 MVGEETKPYSQVLRMADCKICVLAIPTTCLVLWAACEGTLGLTQEAEALLIWKQSLPHQPILESWVSLPSTTNSTTGQAPCSWHGIKCDSSANVIELNLNRTGLQGTLQKFNFSAFSNLLLLNLKFNELTGTIPETIGLLSKLQFLDLNRNHFNGTIPLSLANLTQLYELDLSENDLIGILDPRLFPDGSDQPKTGLIGIKNLLFQDTLLGGTIPNEIGNIRNLTILRLDGNSFYGPIPTSLGNCTHLSILSMSKNSLSGIIPPNFGRLTNLTDIRFHFNNLHGEVPQEFGNLSSLTILLLSRNNFTGHLPPQVCKAELAYTMAVTEKCDVYSFGVLAFEVLMGKHPSNLISQIQNGGAQKINLKEILDPRLSPTKQQNPEELVLIGNLALSCLQTNPQSRPTMRNIAQMIEMETTHYS 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2133 419 Gene3D Ribonuclease Inhibitor 196 305 IPR032675 -
Bisa02g2133 419 FunFam Leucine-rich repeat receptor protein kinase EMS1 214 313 - -
Bisa02g2133 419 Pfam Protein tyrosine and serine/threonine kinase 308 410 IPR001245 GO:0004672|GO:0006468
Bisa02g2133 419 SUPERFAMILY Protein kinase-like (PK-like) 318 411 IPR011009 -
Bisa02g2133 419 Gene3D Ribonuclease Inhibitor 126 188 IPR032675 -
Bisa02g2133 419 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 317 412 - -
Bisa02g2133 419 Gene3D Ribonuclease Inhibitor 42 125 IPR032675 -
Bisa02g2133 419 FunFam Nuclear pore complex protein NUP107 42 186 - -
Bisa02g2133 419 Pfam Leucine rich repeat N-terminal domain 44 89 IPR013210 -
Bisa02g2133 419 Gene3D Transferase(Phosphotransferase) domain 1 306 416 - -
Bisa02g2133 419 SUPERFAMILY L domain-like 74 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2133 Bisa-ChrBisa02 48631430 48634468 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2133 14 327 Receptor kinase-like Gene Family AT4G08850 36.795 1.19e-45 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa02g2133 PK_Tyr_Ser-Thr 2.1e-08 CL0016