Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2113 ATGGCTGCCACCGCCACCACAACTGCCGACGCTCCCCCGCGCCAGCTATCTCAGAAGGAAGCCGACATCCAGATGATGTTGGCCGCCGAGGTCCACCTTGGTACCAAAAATTGTAACTTCCAAATGGAGCGCTATGTCTTCAAGCGCCGCAACGATGGTATCTACATAATTAATCTTGGTAAAACATGGGAGAAACTTCAACTTGCTGCCAGGGTTATTGTTGCCATTGAGAACCCTCAAGATATTATCGTTCAGTCTGCAAGGCCTTATGGTCAAAGAGCTGTTCTTAAGTTTGCTCAATACACTGGTGCCCATGCACTTGCTGGAAGGCACACTCCAGGAACATTCACTAATCAGCTCCAGACATCTTATAGTGAGCCTCGCCTTCTCATTTTAACTGATCCAAGAACAGATCATCAGCCCATCAAGGAAGCTGCTCTTGGAAATATACCGACTATTGCTTTTTGCGACACTGATTCTCCTATGCACTATGTTGATATTGGGATTCCTGCCAATAACAAGGGGAAGCATAGCATTGGTTGTCTCTTTTGGCTATTAGCAAGGATGGTACTGCAGATGCGGGGTACTATTCGTCCAGGGCATAAGTGGGATGTTATGGTGGATTTATTCTTCTATAGAGAACCTGAAGAGACCAAGCAACTAGAGGAAGATGAGGCACCTCCTGTCCAAGATTTTGCTGCTACTGATTTTGGTGCTGCTGGTATTGGCGCCGTTGCTGCTGATGGCCAGTGGCCTGTTGCAATTGAACAGTCCTGGACTGATGTAGTTCCACAACCTATTCCAGCAGTTCCCAGTGTAAACTGGGCCGCCCCAGAAGCCGGAGAGTGGGGTGAATCTGTTCCAGCTCCACAAGTTGCCGTTCCTGGAATTGAAAATGTTCCTGCCACTGGCTGGGAGTAA 921 0.4832 MAATATTTADAPPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHALAGRHTPGTFTNQLQTSYSEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMHYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEETKQLEEDEAPPVQDFAATDFGAAGIGAVAADGQWPVAIEQSWTDVVPQPIPAVPSVNWAAPEAGEWGESVPAPQVAVPGIENVPATGWE 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2113 306 SUPERFAMILY Ribosomal protein S2 18 208 IPR023591 -
Bisa02g2113 306 PANTHER 40S RIBOSOMAL PROTEIN SA 13 301 IPR005707 GO:0003735|GO:0006412|GO:0015935
Bisa02g2113 306 CDD RPS2 26 192 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bisa02g2113 306 PRINTS Ribosomal protein S2 signature 127 144 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bisa02g2113 306 PRINTS Ribosomal protein S2 signature 165 179 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bisa02g2113 306 PRINTS Ribosomal protein S2 signature 23 41 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bisa02g2113 306 PRINTS Ribosomal protein S2 signature 102 119 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bisa02g2113 306 PRINTS Ribosomal protein S2 signature 144 155 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bisa02g2113 306 PRINTS Ribosomal protein S2 signature 53 62 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bisa02g2113 306 Pfam Ribosomal protein S2 26 121 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bisa02g2113 306 Pfam Ribosomal protein S2 124 190 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bisa02g2113 306 Gene3D - 22 227 - -
Bisa02g2113 306 FunFam 40S ribosomal protein SA 22 228 - -
Bisa02g2113 306 NCBIfam 30S ribosomal protein S2 18 214 IPR005707 GO:0003735|GO:0006412|GO:0015935
Bisa02g2113 306 Hamap 40S ribosomal protein SA [rps-0]. 10 278 IPR027498 GO:0003735|GO:0006412|GO:0015935
Bisa02g2113 306 ProSitePatterns Ribosomal protein S2 signature 2. 127 151 IPR018130 GO:0003735|GO:0005840|GO:0006412
Bisa02g2113 306 ProSitePatterns Ribosomal protein S2 signature 1. 23 34 IPR018130 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2113 Bisa-ChrBisa02 48005765 48008044 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2113 1 306 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 71.104 3.34e-151 423