Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2081 ATGGAAGAAGGAACCAATGCCGCACAAGGATGCGTCATTGCTCCGGCATCTAATTACAGGGGAGTTCGCAAGCGAAAATGGGGCAAATGGGTGTCGGAAATTCGTGAGCCTGGAAAGAAAACCCGAATATGGTTAGGGAGCTATGAGGCACCGGAGATGGCGGCAGCAGCTTACGATGTTGCAGCTTCACACCTCCGTGGACACTCGGCCCGGCTTAATTTTCCCGAGTTCTGCGGTGCTCTTCCACAGCCATCAAGCTCTAGGGCTGAGGATATCCGTTTGGCAGCTCAACAGGCAGCATTTCTGTTCAGGAGACCGTTGAGATGCCGGTCGTCGGAGGAGCCCGGTGGTGGCATGGTTCCGGTCACAGCGGGGCTTTCGTCCAGCCAAATCCAAGCCATCAGTGAGTCACCACTGAATTCACCCAAGATGTGGATGCAAATGGCTGAGGCTCTCATGTTAGGGTTTAATGAGCCCATGGCATCGTATGATGATGAAGATGTACAGTTGAGTGGATGGAAAGACATACATCATGAGTCTACATGGGATTTCTAA 555 0.5225 MEEGTNAAQGCVIAPASNYRGVRKRKWGKWVSEIREPGKKTRIWLGSYEAPEMAAAAYDVAASHLRGHSARLNFPEFCGALPQPSSSRAEDIRLAAQQAAFLFRRPLRCRSSEEPGGGMVPVTAGLSSSQIQAISESPLNSPKMWMQMAEALMLGFNEPMASYDDEDVQLSGWKDIHHESTWDF 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2081 184 FunFam Ethylene-responsive transcription factor 2 17 76 - -
Bisa02g2081 184 SUPERFAMILY DNA-binding domain 17 75 IPR016177 GO:0003677
Bisa02g2081 184 Gene3D AP2/ERF domain 18 76 IPR036955 GO:0003700|GO:0006355
Bisa02g2081 184 ProSiteProfiles AP2/ERF domain profile. 18 75 IPR001471 GO:0003700|GO:0006355
Bisa02g2081 184 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Bisa02g2081 184 PRINTS Ethylene responsive element binding protein signature 57 77 IPR001471 GO:0003700|GO:0006355
Bisa02g2081 184 Pfam AP2 domain 18 68 IPR001471 GO:0003700|GO:0006355
Bisa02g2081 184 CDD AP2 17 76 IPR001471 GO:0003700|GO:0006355
Bisa02g2081 184 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 17 141 - -
Bisa02g2081 184 SMART rav1_2 18 81 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2081 Bisa-ChrBisa02 46544992 46545546 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2081 17 183 AP2-EREBP Transcription Factor Family AT1G71450 46.328 6.75e-47 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa02g2081 AP2 3.2e-13 CL0081