Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2079 ATGGTTACTTCAGAGGAAATGGGGTCTGGGAAGCCACAGACGGCAAATTATGGACCTACTTCTTCGGCTCAGCCTTTGTATAAACGACGCCAAGTTTCTGCTATTCGCGATTACCCATCTGGGTTTGAACGATTTGAAGCAAGACGTCGTGCAATGCCAAATGTGGAAACTGCCAAGGCCGCAGCTCTTCAGGATAAGAGGGGCGAAGCTGATCTTCAACACTCCAAGACCTTGAGTTTACTTCCAACAGAGACTTCAAAGGATTTGCATAATAAAGCAGGGTCTTCTTCAAAATTATTGTCCCCAGATAAGAACATAGCTAGTTCCAGTGATAATTCGCACAAGGCTGCGACTAAAAGAGGTGCTCCTTTAACTAGAGTGTCCGCCATTAGAGACTACCCTCCTTTCTGTGGAATTCCTCTGCAGAGTCTTAAGGGGACCTCTCTGGAGGACAAGAGTATGATGCATCAACAGGACTTGGATGTAGAAAGAAAGCCACTGAAAAAGATTGCAGCAAATGGTGTCAAAGAAGTGGAAAAGAATGTCAAAGACATAAAATTGACCGGTGGTACAGAAGAAAGGAAGAGAAAGAAAGTTGATTATTTTGCTCGGCTTGACAGGTCTAAAGCTGCGATCAGGACTGAAGACTCTCTAAGTCAATCTGGGAAGGTTTTAAAAAAGGAAAAGGGAAATGCTGATTCCGAAAGAATTGGTAAACCTGTAATCCGGGATAGAAAGGATCCTGTCAATACTAATGATAGTATTGAATTTTCTGATGTACATAGATCAAGTGGCTTCAATGTAAATGTTCCTCCTCTCGGTCATCGTGATTTGAGTGGTTGCAGCAGCAACTCAAGTGTGACCCGAAATACAGTGAGAGAGACAATGCGCATGTTCCAAGCTGTTTATAGAAAGCTATTGCAGAAAGAAGAAGCAAAGTTAAAAGATCAAGGGGGAAATGTGATGGAAACCAAAAAAGTACCCGAAGATCAGAAGCTTGAGGGGGGCAATCTTGCTTTGAAGAACAGTGGTGAGAAAAAGAATCCTGTTAGGGTGATACGTGGCTCTTTGTCAGAAGATGGAAGGTCTAAGAGATATGTGTATGATGGTTTGTATGTAGTTGAGACATACTGGCAGGAAACGGGGCCACGTGGTAAGCTGGTTTTCAAGTTTCGACTACGAAGAAGGCCAGGACAACCAGAGCTTGCCTGGATTGAAATGAAAAAATCCAAAAAGTTCATGGTAAGGAGGGGTGTATGTGTTGATGACATCTCTCACGGGAAAGAGCCATTTCCAATTTGCGCTGTGAACACCATAAATAATGAAAAACCACCATCATTTACTTACACAACTAGAATGAGATATCCTGATTGGTGCCGTCCTGTTCCAGCAGAGGGATGAGAGCTTCTTGAAGACAAAGAAGCTGAACAAAGAACCAGTAATGATGAATATTTGTTTGATATTGGAAATAATTTCAACAATAACAATCCTCTTTCCGATGGACCTTCAAGGTGTATACCTGACAAACAGTTGGATTCTCCTGCAGCCTCCGAGGGTGGTAGCTTTACCATTGATGCAGCTCAGTATGTGAGAATGTTTCTGCATAGCAACTCTTTCTCTCTCTTATTGGTTCCTCTCCTTGCAGCTTTTGCATATGTCACACACTATAATCATCCCATTCCAAATCAGCAGTTTCTGAACTACTTTTTCTTCTTCTCACCATCGTCATCACTGTTGAATCTTGCACATCATCACCATAACCATCGTCCCCACAAGAAACGCCATGATAATAGCAGCAGCGGTGGAGACTCCAATATTTGTGATGATTTTCCACCAGGCATTCCTCCCCCAAACACCAAAACTACCTCCTATCTTTGTGTCGATCGAAGAGGGTGCTGCAATTTCACGACTGTGCAAGCAGCTGTTAATGCTGTTCCTGATTTTAGCGACAAAAGGACCGTCGTATGGATTAACAGTGGCATTTATTATGAAAAAGTGATGGTGCCCAAAACCAAACCCAATATCACTTTTCAAGGACAGGGCTTCACTTCAACCGCAATTGCTTGGAACGACACTGCAAAGTCTGCAAATGGCACATTTTATAGTGGCTCTGTACAAGTTTTCGCCTCCAACTTCATTGCCAAGAACATAAGCTTCATGAACGTGGCACCAATTCCAGGTCCCGGGGCTGAACAAGCACAAGCAGTAGCAATACGAGTCGGAGCCGATCAAGCTCAATTCTTGGGCTGCGGTTTCTTTGGAGCCCAAGATACCCTTCACGATGACACAGGTCGCCACTACTTCAAAGATTGCTATATCCAAGGCTCAATTGATTTCATATTCGGTAATGCAAGGTCACTCTACGAGAATTGTGAAATAGTTTCAATGGCAAACCCAGTGGCAGCAGGAGTGAGGTTCATAAACGGGGCAGTGACAGCTCACGGGAGAGCATCGAGTGAGGAGAACACAGGTTTTGCTTTTGTGAACTGTGCCATTGGAGGCACTGGAAGAATATGGCTGGGTCGGGCATGGCGTCCTTATTCTCGTGTTGTTTTTGCCTTCACAACAATGTCTGATATCATTGCCCCGGAGGGTTGGAATGATTTCAGAGACCCTTCTAGAGATCAGACTGTCTTCTATGGAGAGTACAATTGCTCGGGGCCTGGGGCTAATATGACTTTGAGAGCGTCGTATGTACAGAGATTAAATGCCACACAGGCTTCTACTTTCCTCAATGCAACATTTATTGATGGGGACAAATGGTTGTAA 2769 0.4388 MVTSEEMGSGKPQTANYGPTSSAQPLYKRRQVSAIRDYPSGFERFEARRRAMPNVETAKAAALQDKRGEADLQHSKTLSLLPTETSKDLHNKAGSSSKLLSPDKNIASSSDNSHKAATKRGAPLTRVSAIRDYPPFCGIPLQSLKGTSLEDKSMMHQQDLDVERKPLKKIAANGVKEVEKNVKDIKLTGGTEERKRKKVDYFARLDRSKAAIRTEDSLSQSGKVLKKEKGNADSERIGKPVIRDRKDPVNTNDSIEFSDVHRSSGFNVNVPPLGHRDLSGCSSNSSVTRNTVRETMRMFQAVYRKLLQKEEAKLKDQGGNVMETKKVPEDQKLEGGNLALKNSGEKKNPVRVIRGSLSEDGRSKRYVYDGLYVVETYWQETGPRGKLVFKFRLRRRPGQPELAWIEMKKSKKFMVRRGVCVDDISHGKEPFPICAVNTINNEKPPSFTYTTRMRYPDWCRPVPAEGXELLEDKEAEQRTSNDEYLFDIGNNFNNNNPLSDGPSRCIPDKQLDSPAASEGGSFTIDAAQYVRMFLHSNSFSLLLVPLLAAFAYVTHYNHPIPNQQFLNYFFFFSPSSSLLNLAHHHHNHRPHKKRHDNSSSGGDSNICDDFPPGIPPPNTKTTSYLCVDRRGCCNFTTVQAAVNAVPDFSDKRTVVWINSGIYYEKVMVPKTKPNITFQGQGFTSTAIAWNDTAKSANGTFYSGSVQVFASNFIAKNISFMNVAPIPGPGAEQAQAVAIRVGADQAQFLGCGFFGAQDTLHDDTGRHYFKDCYIQGSIDFIFGNARSLYENCEIVSMANPVAAGVRFINGAVTAHGRASSEENTGFAFVNCAIGGTGRIWLGRAWRPYSRVVFAFTTMSDIIAPEGWNDFRDPSRDQTVFYGEYNCSGPGANMTLRASYVQRLNATQASTFLNATFIDGDKWL 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2079 922 MobiDBLite consensus disorder prediction 76 116 - -
Bisa02g2079 922 ProSiteProfiles YDG domain profile. 238 395 IPR003105 -
Bisa02g2079 922 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 613 922 - -
Bisa02g2079 922 MobiDBLite consensus disorder prediction 1 123 - -
Bisa02g2079 922 SMART preset_2 421 506 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Bisa02g2079 922 MobiDBLite consensus disorder prediction 583 614 - -
Bisa02g2079 922 Pfam SAD/SRA domain 317 399 IPR003105 -
Bisa02g2079 922 Gene3D SET domain 416 468 IPR046341 -
Bisa02g2079 922 SUPERFAMILY Pectin lyase-like 624 922 IPR011050 -
Bisa02g2079 922 SUPERFAMILY SET domain 411 536 IPR046341 -
Bisa02g2079 922 Gene3D - 274 415 IPR036987 -
Bisa02g2079 922 SUPERFAMILY PUA domain-like 318 426 IPR015947 -
Bisa02g2079 922 FunFam Pectinesterase 619 922 - -
Bisa02g2079 922 SMART G9a_1 274 399 IPR003105 -
Bisa02g2079 922 MobiDBLite consensus disorder prediction 1 28 - -
Bisa02g2079 922 Pfam Pectinesterase 627 919 IPR000070 GO:0030599|GO:0042545
Bisa02g2079 922 ProSitePatterns Pectinesterase signature 2. 773 782 IPR033131 -
Bisa02g2079 922 Gene3D - 618 922 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2079 Bisa-ChrBisa02 46496984 46506889 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2079 605 922 Carbohydrate Esterase AT1G05310 73.270 4.89e-180 524