Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2073 ATGAATTACTGCAGCACATCATCAAATGATCAGACTCAGAGCAGCAAGAAGTACAAGGGAGTCCGGCAGCGTAAATGGGGTAAGTGGGTGTCGGAGATTCGGGTGCCCGGCTCGCAACAGCGGCTGTGGCTGGGGAGTTACGCCACGCCGGAGGCCGCCGCGGTGGCTCACGACGTCGCCTTCTATTGTCTGAGGAGACCGGCTTCTTTGGAGGTGCTTAACTTCCCGGAGATGTTGCCTTCTTGTGTCCAGCAGAGACAGATGTCGCCCCGCTCCGTGCAGACGGCGGCTTCCGACGCCGGCATGGCCGTTGATGCGCAGAGCATTACGGCGGCGGGGAAGGACAAAACTGAAGTGAACGATGCTCTCTTGTGGTGCGATGAAAGCAACAGAGAAGGGGAAGCCTTGAGCATTTCTGTATCTGATTATATTCAAGACTTCGAACACTACTAG 453 0.5607 MNYCSTSSNDQTQSSKKYKGVRQRKWGKWVSEIRVPGSQQRLWLGSYATPEAAAVAHDVAFYCLRRPASLEVLNFPEMLPSCVQQRQMSPRSVQTAASDAGMAVDAQSITAAGKDKTEVNDALLWCDESNREGEALSISVSDYIQDFEHY 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2073 150 Gene3D AP2/ERF domain 16 78 IPR036955 GO:0003700|GO:0006355
Bisa02g2073 150 Pfam AP2 domain 17 66 IPR001471 GO:0003700|GO:0006355
Bisa02g2073 150 SMART rav1_2 17 82 IPR001471 GO:0003700|GO:0006355
Bisa02g2073 150 SUPERFAMILY DNA-binding domain 17 76 IPR016177 GO:0003677
Bisa02g2073 150 PRINTS Ethylene responsive element binding protein signature 40 56 IPR001471 GO:0003700|GO:0006355
Bisa02g2073 150 PRINTS Ethylene responsive element binding protein signature 18 29 IPR001471 GO:0003700|GO:0006355
Bisa02g2073 150 CDD AP2 16 77 IPR001471 GO:0003700|GO:0006355
Bisa02g2073 150 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 9 114 - -
Bisa02g2073 150 ProSiteProfiles AP2/ERF domain profile. 17 76 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2073 Bisa-ChrBisa02 46311716 46312168 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2073 13 149 AP2-EREBP Transcription Factor Family AT1G22810 54.348 1.30e-47 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa02g2073 AP2 4.2e-11 CL0081