Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2062 ATGAGTACTGATCATGAACCCAACACTGAACGGGGCAATATTGAGAATAGAGATGGCTTTGTATCAAACATGCTAGGAGATATTGCAAGAGTGAATGGACAGCTAGTAGTTCTCGTGCATTTGGAGACAAAAACCTTATATATATCGCACTTGCAATCTGATCCTGATGTATGTCATGCCAATATTAACCCAGATACTGAGCTTTTGATACTTGCAAGTGATGGCCTACAAGTACCATTCTGTGAGGAGGAGATTGTTGGTAAAAAAAATATGGGGTGCATCTGCTCAAAAAAACAAAATAAAGTTGATGAATCTGAGAAAGAAAAAGAGCTAAGCAAGTCATCATTTGTACAACTGGTTGCTCCTACTTTCTCACCTGCAAAGTTAGGTGGTGTCGGCGACACTGATGGTTCAGTGAATCGGGTGCTTAGGAAATATTCGCAAGCAAATGCAAGATTATCTCTGGATGTACCATTAGAAGATAAAAACAGATACAAGGTAGTAGTTGATGGTAAACCAATAACAGGTCAATATCAGAAATGTATGACATTAGGTGCTAGTGTTGTTGGGCAAGGAAAGCCAACGATGTCTAGAACACTTAGCTTGTCAAAAAGTGCAGAAGGAGAACATGTTGCTGCTGGATGGCCATTGTGGTTATCCTCAGTTGCAGGAGATGCCATCAAAGGGTGGGTGCCTCGACGGCTAGACTCTTTCGAGAAGTTAGGCCAAGTTGGACATGGTGCTTATAGCACTGTATATAAGGCTCATGACCTCCAAACCGGTAAAATCGTGGCATTGAAGAAAGTGCGTTTTTCAAATTCAGATACAGAAAGTGTCCGTTTTATGGCCAGGGAAATCTACATCTTGCGTCAACTTGACCATCCAAATGTCATGAAGCTTGAGGGCATTATCACATCAAGGACATCCAGCAGCTTGTATCTTGTTTTTGAGTACATGGAACATGACCTTGCTGGACTTGAAGCAATGCCTGGCATAAAGTTCACAGAACCCCAGATTAAATGTTTTATGCAGCAATTGCTTTGTGGGCTAGAGCACTGCCATAGTCGGGGTGTGCTGCACCGTGACATCAAGGGTTCAAATCTACTGATTGACAGCAATGGAATTCTTAAGATTGGAGACTTTGGCCTTTCAACTATTTGTGATCCTAACAACAAGCAGCCGTTGACTAGCCGTGTTGTGACTTTGTGGTATAGGCCACCTGAGCTTTTGCTTGGCGCTACAGACTATGGAGCTGCAATTGATTTGTGGAGTGCTGGTTGCATTCTAGCAGAGCTGCTGGTTGGGAAGCCTATTATGCCTGGAAGAACAGAGGTGGAACAAATGCACAAGATTTTTAAGCTTTGTGGTTCCCCATCTGAGGATTTTTGGCAGAGAACAAAATTGCCACATGCAACAAGTTTTAAACCTCAATGCCATTACAAACGTCGTGTTCATGAAGCATTTAGAGACTTTCCTTGTACAGCCTTGGCTCTTGTTGATAAGCTCCTTGCAATAGAACCAGAAGCTCGAGGATCAGCAGCTGCTGCACTTCAGAATGAGTTTTTCACAACGAATCCCCTGCCTTGTGATCCATCAAGTTTACCGAAGTTTCAGAGCAAGGATTCTGATGCTAAACTTCAAGATGAGGAAGCAATAAGGAAAAACACCGAAGTTGTAAAAAGACGTGGGCCGGTGTCTGTTGCAAGTGGTGCAAGAGATACAGAAGCACTTCGAACACCAGACTTCAATGCTTCAGGAAATATATCTGTACGGGCCAATCCAAATACTAAAACGTCCAATGATAAATGTAACCCCTCTGAGGCTTGTAAAACATCAGATGCTAGAGGGAAGAATCCGGAGTTGACAACACAGAGATCTAATGTAAATCAGGCAGCAGCAGATTCTTCTACCTCTTCTCTTGAAAAGGGTACAGGCATCCGTGGCAGAGAACCTGGATTGGGTTTTTTGTCACAGAAAAATAGGATGCATCGCTCTGGACCGTTGGTGCCTTCAGGGAGTAACATCGATGACATGCTCAAAGAGCACGAGAGATTAATGCAAGAGGCATTCCGTGCTGTCAAGGACAAGAACAATAATAAAAGTGAGAATTACCATTAA 2118 0.4292 MSTDHEPNTERGNIENRDGFVSNMLGDIARVNGQLVVLVHLETKTLYISHLQSDPDVCHANINPDTELLILASDGLQVPFCEEEIVGKKNMGCICSKKQNKVDESEKEKELSKSSFVQLVAPTFSPAKLGGVGDTDGSVNRVLRKYSQANARLSLDVPLEDKNRYKVVVDGKPITGQYQKCMTLGASVVGQGKPTMSRTLSLSKSAEGEHVAAGWPLWLSSVAGDAIKGWVPRRLDSFEKLGQVGHGAYSTVYKAHDLQTGKIVALKKVRFSNSDTESVRFMAREIYILRQLDHPNVMKLEGIITSRTSSSLYLVFEYMEHDLAGLEAMPGIKFTEPQIKCFMQQLLCGLEHCHSRGVLHRDIKGSNLLIDSNGILKIGDFGLSTICDPNNKQPLTSRVVTLWYRPPELLLGATDYGAAIDLWSAGCILAELLVGKPIMPGRTEVEQMHKIFKLCGSPSEDFWQRTKLPHATSFKPQCHYKRRVHEAFRDFPCTALALVDKLLAIEPEARGSAAAALQNEFFTTNPLPCDPSSLPKFQSKDSDAKLQDEEAIRKNTEVVKRRGPVSVASGARDTEALRTPDFNASGNISVRANPNTKTSNDKCNPSEACKTSDARGKNPELTTQRSNVNQAAADSSTSSLEKGTGIRGREPGLGFLSQKNRMHRSGPLVPSGSNIDDMLKEHERLMQEAFRAVKDKNNNKSENYH 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2062 705 MobiDBLite consensus disorder prediction 580 607 - -
Bisa02g2062 705 ProSitePatterns Serine/Threonine protein kinases active-site signature. 358 370 IPR008271 GO:0004672|GO:0006468
Bisa02g2062 705 MobiDBLite consensus disorder prediction 616 643 - -
Bisa02g2062 705 SUPERFAMILY Protein kinase-like (PK-like) 231 530 IPR011009 -
Bisa02g2062 705 FunFam probable serine/threonine-protein kinase At1g54610 225 320 - -
Bisa02g2062 705 SUPERFAMILY PP2C-like 1 86 IPR036457 -
Bisa02g2062 705 Pfam Protein phosphatase 2C 1 76 IPR001932 -
Bisa02g2062 705 MobiDBLite consensus disorder prediction 563 675 - -
Bisa02g2062 705 Pfam Protein kinase domain 238 522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g2062 705 Gene3D Transferase(Phosphotransferase) domain 1 326 561 - -
Bisa02g2062 705 ProSitePatterns Protein kinases ATP-binding region signature. 244 267 IPR017441 GO:0005524
Bisa02g2062 705 ProSiteProfiles Protein kinase domain profile. 238 522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g2062 705 Gene3D - 1 131 IPR036457 -
Bisa02g2062 705 CDD STKc_CDK9_like 238 522 - -
Bisa02g2062 705 Gene3D Phosphorylase Kinase; domain 1 232 325 - -
Bisa02g2062 705 FunFam probable serine/threonine-protein kinase At1g54610 321 561 - -
Bisa02g2062 705 SMART serkin_6 238 522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g2062 705 Coils Coil 679 699 - -
Bisa02g2062 705 PANTHER CELL DIVISION PROTEIN KINASE 236 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2062 Bisa-ChrBisa02 46107405 46123026 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2062 230 562 Core Cell Cycle Gene Families AT5G10270 51.149 1.20e-115 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Bisa02g2062 Pkinase 4.2e-67 CL0016