Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2044 ATGGGGACACGACCTCAGCAACCTTGTCGAGAGGAAGAGGAGGAGGAGCTATTAGGTCGTGGGACAACGCTTTCAGGCCAATCAATTTCAACAAGCAGAAGTGTTGGGTCGCCATCCAGCCGGAGTGAGCAGACAATGGCTACACCAGCCAGTGATAACACTTTTCTAAGATTAAACCATCTTGACATCCATGGTGATGATGCTGGATCCCAAGGAGCAGTTGCTAGCAAGAAGAAAAAGAGAGGCCAACGTGCTGTCGGAGGTGATAAGAGTGGAAGAGGGCTTCGCCAATTTAGCATGAAAGTTTGTGAGAAGGTGGAAAGCAAGGGAAGAACCACTTACAATGAGGTAGCAGATGAACTTGTGGCTGAATTTGCTGACCCAAGCAATAGTGTTTCATCTCCTGATCAGCAACAATATGATGAGAAAAACATTCGTCGGAGGGTCTATGATGCTTTGAATGTTCTCATGGCAATGGATATAATTTCAAAGGATAAAAAGGAAATACAATGGAAGGGTCTCCCTCGTACTAGTCTGAATGATATTGAGGAATTAAAGACGGAGCGTCTCGGGCTCAGGAATAGGATTGAAAAGAAAGCTGCCTACCTGCAAGAGCTGGAGGAGCAATACATAGGTCTGCAGAACCTCATACAACGGAATGAGCAATTATATGGCTCAGGAAATGCCCCCAGTGGAGGTGTAGCTTTGCCTTTTATTCTGGTACAGACTCGCCCTCATGCAACTGTTGAAGTGGAAATATCAGAAGATATGCAGCTTGTACATTTTGATTTCAACAGCACTCCTTTTGAGCTGCATGATGACAACTATGTTCTCAAGGCAATGAAATTTTGCGACAGACCACAGAGTGATAATGTGACCCACAGTCTTACAGATGGCGGTGAAGGGTCTAGTATGTCAGGCTTGTATCAGGCTCAGGTTCCTCCTGTCTCAAACCAACCAGTTAGAACTCCCACCTCACCACCTCTTCCCGGAATATTGAAGGCAAGAGTTAAGCATGAGCACTAA 1026 0.4561 MGTRPQQPCREEEEEELLGRGTTLSGQSISTSRSVGSPSSRSEQTMATPASDNTFLRLNHLDIHGDDAGSQGAVASKKKKRGQRAVGGDKSGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFADPSNSVSSPDQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSLNDIEELKTERLGLRNRIEKKAAYLQELEEQYIGLQNLIQRNEQLYGSGNAPSGGVALPFILVQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDNYVLKAMKFCDRPQSDNVTHSLTDGGEGSSMSGLYQAQVPPVSNQPVRTPTSPPLPGILKARVKHEH 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2044 341 FunFam Transcription factor-like protein DPB 179 303 - -
Bisa02g2044 341 Pfam Transcription factor DP 181 294 IPR014889 -
Bisa02g2044 341 Coils Coil 189 223 - -
Bisa02g2044 341 SMART DP_2 180 339 IPR014889 -
Bisa02g2044 341 MobiDBLite consensus disorder prediction 1 93 - -
Bisa02g2044 341 FunFam Transcription factor-like protein DPB 85 178 - -
Bisa02g2044 341 Gene3D - 85 178 IPR036388 -
Bisa02g2044 341 Pfam E2F/DP family winged-helix DNA-binding domain 93 173 IPR003316 GO:0005667|GO:0006355
Bisa02g2044 341 SUPERFAMILY "Winged helix" DNA-binding domain 93 174 IPR036390 -
Bisa02g2044 341 SUPERFAMILY E2F-DP heterodimerization region 179 294 IPR037241 -
Bisa02g2044 341 PIRSF Txn_factor_DP 4 341 IPR015648 GO:0005667|GO:0051726
Bisa02g2044 341 Gene3D Transcription factor DP 179 300 IPR038168 -
Bisa02g2044 341 PANTHER TRANSCRIPTION FACTOR DP 23 295 IPR015648 GO:0005667|GO:0051726
Bisa02g2044 341 SMART E2F_TDP_2 90 173 IPR003316 GO:0005667|GO:0006355
Bisa02g2044 341 MobiDBLite consensus disorder prediction 21 55 - -
Bisa02g2044 341 CDD DP_DD 178 281 IPR014889 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2044 91 282 E2F-DP Transcription Factor Family AT5G02470 56.477 2.12e-78 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Bisa02g2044 DP 6.4e-42 No_clan