Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1998 ATGGCATCTGATTTGAATGGACCAGCAGCCGATAACACGCTCAAGTCTATCTGTTACAAGCGTGGTTCGCTTCAGCTTCTTGATCAGAGAAAGCTCCCTCTGGAAACAGTTTACTTGGATATCCAGGATTCAATAGATGGATGGAATGCTATACGAGATATGGTGGTCCGAGGAGCACCTGCTATAGCTATCGCAGCGGCACTCTCTTTGGCTGTCGAAGTGTCCAAATTAGAGGATTTTAATGGTTCACCCGGTGATACTGCTTCCTTCCTTGAAAAGAAATTAGATTATCTTGTCTCAAGTCGGCCAACAGCAGTGAACCTTTCAGATGCTGCCACGAAACTCAAAGAAGTTATATTTAAGGCTGTTGCTTCTACTTTAGAGGCCAAAAGTGTTTTTCAGGTTTATATAGAAACTGCTGAAATTATGCTCAAGGATGATGTTGCCTCGAATAGAGCAATCGGATTGTTTGGAGCTAGTTTTATTCAACAACAGACAAGGAAACCAAAGCTTTCTGTTTTGACCCATTGTAACACTGGAAGTCTCGCTACTGCTGGATATGGTACTGCTCTCGGTGTAATCCGTGCACTTCATAGTGAAGGAGTTTTAGAAAGGGCCTATTGCACTGAAACACGCCCATTCAATCAGGGCTCTAGGCTCACGGCCTTTGAGTTGGTGCATGAGAGCATACCAGCAACTCTTATAGCAGATTCTGCTGCGGCTGCACTAATGAAAGCCGGGCATGTAGATGCTGTTGTTGTTGGGGCAGACCGTGTTGCATCAAATGGTGATACAGCCAACAAAATTGGAACATATAGCGTTGCCTTATGCGCCAAGTTTCATAATGTACCTTTTTACGTGGCTGCTCCCCTCACTTCTGTTGATTTATCACTTTCTTCTGGACAAGATATTATCATCGAGGAACGATCTCCCAAGGAATTGTTGAACGCGCGGGGAGGACTTGGGGAGCCAGTTGCAGCCCCTGGAATTTCTGTGTGGAACCCTGCTTTTGACGTTACACCGGCCAGTCTAATATCTGGGATCGTCACGGAGAAGGGTGTCGTTACCAAGACAGGTGCTGATTCCTTTGACATAAAAACTTTCACACAGAAGACAGGTTAA 1122 0.4519 MASDLNGPAADNTLKSICYKRGSLQLLDQRKLPLETVYLDIQDSIDGWNAIRDMVVRGAPAIAIAAALSLAVEVSKLEDFNGSPGDTASFLEKKLDYLVSSRPTAVNLSDAATKLKEVIFKAVASTLEAKSVFQVYIETAEIMLKDDVASNRAIGLFGASFIQQQTRKPKLSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCTETRPFNQGSRLTAFELVHESIPATLIADSAAAALMKAGHVDAVVVGADRVASNGDTANKIGTYSVALCAKFHNVPFYVAAPLTSVDLSLSSGQDIIIEERSPKELLNARGGLGEPVAAPGISVWNPAFDVTPASLISGIVTEKGVVTKTGADSFDIKTFTQKTG 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1998 373 NCBIfam S-methyl-5-thioribose-1-phosphate isomerase 15 357 IPR005251 -
Bisa02g1998 373 Gene3D - 12 203 IPR027363 -
Bisa02g1998 373 Gene3D - 204 369 IPR042529 -
Bisa02g1998 373 Pfam Initiation factor 2 subunit family 56 356 IPR000649 GO:0044237
Bisa02g1998 373 FunFam Methylthioribose-1-phosphate isomerase 169 366 - -
Bisa02g1998 373 SUPERFAMILY NagB/RpiA/CoA transferase-like 12 359 IPR037171 -
Bisa02g1998 373 NCBIfam S-methyl-5-thioribose-1-phosphate isomerase 43 357 IPR011559 GO:0044249
Bisa02g1998 373 Hamap Putative methylthioribose-1-phosphate isomerase [mtnA]. 14 365 IPR005251 -
Bisa02g1998 373 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 10 370 - -
Bisa02g1998 373 FunFam Methylthioribose-1-phosphate isomerase 12 203 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1998 53 371 Eukaryotic Initiation Factors Gene Family AT2G05830 77.500 1.94e-174 486