Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1982 ATGATCGGATTGCAGCTTCTCAAGCCAGTTCTGTATCTGCTAGTTTCACTTTCTTGTTGCCTGACATGTTTGGGAGACAATGACATGGCTGTCCAATTGAATGACGATGTTCTTGGCCTGATTGTGTTCAAATCAGACCTCCATGATCCTTCTTCTTATCTTGCTTCGTGGAACGAAGACGACACGAGTCCGTGCTCGTGGCGGTTCGTGCAATGCAATCCGGCGACCGGAAGAGTTTCGGAGGTCTCACTCAATGGTTTAGGCTTATCTGGGAAAATAGGAAGAGGCCTGGAAAAATTGCAGCATCTCAAGGTACTGTCACTCTCTCATAACAACTTGACTGGGAGCATCAGTCCATCACTTGCTCTTTCCAACACTCTTCAAAGCCTAAACCTTACTCACAACCGTCTCTCTGGTCCTATTCCCACTTCTTTTGTGAACTTCAGTTCAATTAGGTCCCTTGACCTCTCACAGAATTCATTTTCAGGACAAGTCCCTGAAGACTTGTTCCAAAACTGCTTTTCCCTTCACTACCTTTCTTTAGCATGGAATATGTTGGAAGGTTCATTCCCCAGCACAATTTCTAGATGCTTCTTGTTAAATAACCTTAATCTTTCCAGCAATCTTTTTTCTGGTAACGTGGACTTCAGTGCTATTTGGTCTTTGGAGAGGCTTAGGACTTTGGATCTCTCAAACAATGCCTTATCAGGATATTTACCACCTGGAATATCAGCCATACATAACTTGAAAGAGATGTTATTACAAGGTAATCACTTTTCAGGACCATTACCTTCTGATATTGGACTCTGCTTGCATTTGAATAGGTTGGACTTGAGTGATAATTTGTTCAATGAAGCACTCCCAGAGTCACTTGGGAGGCTTAATTCCTTGACCATTTTTAAAGCACAAAATAATTTGTTAACAAATGAACTTCCTCAGTGGATTGGCAACATAACAAGCTTAGAGTTCCTTGATCTCTCAAACAATCAGCTCACCGGAATCATCCCTGCTTCGATCGGCAAACTGACGTCGCTAACTTATCTGAGTCTTTCAAATAACAAGCTTGCAGGAAACATTCCATCATCATTGGTTTTCTGTACTAAGTTATCCTCCATACATCTAAGAGGTAATGGTTTCAATGGTAGCATACCAGAGGGCTTGCTTGGCCTAGGATTATTGGAGGAAATAGACTTATCTCATAATGACCTTATGGGTTCAATCCCTCGAGAGATAGGTCCTGTTTCAAAAATAAGGTATTTGAATCTGTCTTGGAATGATCTTCACTCTCAAATGCCTCCAGAACTGGGCCTCCTTCAGAATCTGACAGTTTTAGATCTTCAGATCAATTCCTTGTATGGATCTATTCCACAAGATTTATGTGACTCAGGCAATTTGGCCATTCTTCAACTTGATGGAAATTCATTGGATGGTTCTATTCCAGATGAGATTGGGAATTGTACATCTCTTTACTTACTGAGTTTGTGTCACAACAATTTGAGCGGTCGAATTCCGAAGTCCATGTCAAAGGTGAACAAACTTGAAGTGCTGAGATTGGAGTTCAATGAACTAAGCGGGGAGATACCACAGGAGCTTGGAATGCTTCAGAATCTTCTGGCAGTGAATATATCACACAACAAACTCACAGGCAGGCTTCCAAGTGGTACTATATTTCAAAACTTAGACAAAAGTGCTTTGGAAGGAAACTCAGGTCTTTGCTCTCCCTTACTGAAAGGTCCATGCAAGATGAACGTGCCAAAGCCACTGGTTCTTGACCCAAACGCCTATAACAACCAAATGGGTCCTCACAGGCAGAGAAATGAATCAGACATGACTATGCCTAGCAAAATCCATCACCACAAGTTCCTAAGTGTTTCTGCAATTGTAGCCATTTCGGCTGCTTTTGTGATCATACTTGGAGTTATTGCTATTAGCCTTCTTAATGCTTCCGTAAGAAGAAGGCTAGCGTTTGTGGATAGTGCTTTGGAAAGCATGTGCTCAAGCTCTTCAAGATCAGGATGTCCACCCACTGGAAAGCTCATTCTGTTCGATTCAGGCCGTTCATCCTCCCCGGGTTCCATTGGGAACCTGGATTCCTTGCTTGTCAAGGCATCTGAGATAGGAGAAGGAGTGTTTGGAACAGTTTACAAGGTTGCTCTGGGATCACAGGGCAAAATGGTAGTAGCAATTAAGAGGCTTGTGACTTCAAATATAATTCAGTACCCTGAAGACTTTGATAGGGAAGTTAGAATCCTAGGAAAAGCAAGGCACCCAAATCTAATCGAACTGAAAGGATACTATTGGACTCCTCAAACGCAACTTTTGGTCTCAGACTATGCAACAAATGGTAGCTTGCAGGCCAAGTTACATGAAAGGCTTCCTTCAACTCCACCCCTTTCATGGCCTAATAGGTTCAAAATCTTGCTTGGAACAGCAAAGGGGCTTGCTCATTTGCACCATTCATGCCGCCCGCCCATCATTCACTACAACCTAAAGCCCAGCAATGTCTTGCTTGACGAGAACTGCAACCCCAAGATCTCGGACTTTGGGTTAGCTCGGCTTCTGATAAAGCTAGACAGGCATGTGATGAGCAATAGGTTTCAAAGTGCACTGGGATATGTAGCACCAGAACTGGCGTGCCAGAGCTTGAGGGTGAATGAGAAGTGCGATATCTACGGTTTTGGGGTGATGATACTGGAGGTGGTCACCGGAAGGAGGCCGGTGGAATATGGAGAAGACAATGTGCTGATATTGAAGGACCATGTGAGGGTGCTGCTTGAGCAAGGGAATGTTTTGGAATGTGTGGATCCAAGCATGAGTGAGTACCCTGAGGATGAAGTACTGCCAGTTCTCAAGTTGGCATTGGTATGCACCTCTCAAATTCCTTCGAGCAGGCCTTCCATGGCTGAAGTGGTCCAAATACTACAGGTCATTGAAACCCCTGTTCCTCAAAGGATGGAAATGTTTTGA 2967 0.4361 MIGLQLLKPVLYLLVSLSCCLTCLGDNDMAVQLNDDVLGLIVFKSDLHDPSSYLASWNEDDTSPCSWRFVQCNPATGRVSEVSLNGLGLSGKIGRGLEKLQHLKVLSLSHNNLTGSISPSLALSNTLQSLNLTHNRLSGPIPTSFVNFSSIRSLDLSQNSFSGQVPEDLFQNCFSLHYLSLAWNMLEGSFPSTISRCFLLNNLNLSSNLFSGNVDFSAIWSLERLRTLDLSNNALSGYLPPGISAIHNLKEMLLQGNHFSGPLPSDIGLCLHLNRLDLSDNLFNEALPESLGRLNSLTIFKAQNNLLTNELPQWIGNITSLEFLDLSNNQLTGIIPASIGKLTSLTYLSLSNNKLAGNIPSSLVFCTKLSSIHLRGNGFNGSIPEGLLGLGLLEEIDLSHNDLMGSIPREIGPVSKIRYLNLSWNDLHSQMPPELGLLQNLTVLDLQINSLYGSIPQDLCDSGNLAILQLDGNSLDGSIPDEIGNCTSLYLLSLCHNNLSGRIPKSMSKVNKLEVLRLEFNELSGEIPQELGMLQNLLAVNISHNKLTGRLPSGTIFQNLDKSALEGNSGLCSPLLKGPCKMNVPKPLVLDPNAYNNQMGPHRQRNESDMTMPSKIHHHKFLSVSAIVAISAAFVIILGVIAISLLNASVRRRLAFVDSALESMCSSSSRSGCPPTGKLILFDSGRSSSPGSIGNLDSLLVKASEIGEGVFGTVYKVALGSQGKMVVAIKRLVTSNIIQYPEDFDREVRILGKARHPNLIELKGYYWTPQTQLLVSDYATNGSLQAKLHERLPSTPPLSWPNRFKILLGTAKGLAHLHHSCRPPIIHYNLKPSNVLLDENCNPKISDFGLARLLIKLDRHVMSNRFQSALGYVAPELACQSLRVNEKCDIYGFGVMILEVVTGRRPVEYGEDNVLILKDHVRVLLEQGNVLECVDPSMSEYPEDEVLPVLKLALVCTSQIPSSRPSMAEVVQILQVIETPVPQRMEMF 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1982 988 ProSiteProfiles Protein kinase domain profile. 700 977 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g1982 988 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 33 193 - -
Bisa02g1982 988 Pfam Leucine rich repeat N-terminal domain 34 73 IPR013210 -
Bisa02g1982 988 Pfam Protein kinase domain 702 972 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g1982 988 Pfam Leucine Rich repeat 100 115 IPR001611 GO:0005515
Bisa02g1982 988 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 194 288 - -
Bisa02g1982 988 Gene3D Ribonuclease Inhibitor 36 190 IPR032675 -
Bisa02g1982 988 ProSiteProfiles Leucine-rich repeat profile. 320 341 IPR001611 GO:0005515
Bisa02g1982 988 ProSiteProfiles Leucine-rich repeat profile. 102 124 IPR001611 GO:0005515
Bisa02g1982 988 Gene3D Ribonuclease Inhibitor 290 583 IPR032675 -
Bisa02g1982 988 SUPERFAMILY L domain-like 50 384 - -
Bisa02g1982 988 ProSitePatterns Protein kinases ATP-binding region signature. 706 730 IPR017441 GO:0005524
Bisa02g1982 988 SUPERFAMILY Protein kinase-like (PK-like) 702 978 IPR011009 -
Bisa02g1982 988 PRINTS Leucine-rich repeat signature 342 355 - -
Bisa02g1982 988 PRINTS Leucine-rich repeat signature 321 334 - -
Bisa02g1982 988 SUPERFAMILY L domain-like 324 574 - -
Bisa02g1982 988 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 291 383 - -
Bisa02g1982 988 Gene3D Phosphorylase Kinase; domain 1 700 782 - -
Bisa02g1982 988 Gene3D Transferase(Phosphotransferase) domain 1 783 985 - -
Bisa02g1982 988 SMART LRR_typ_2 222 246 IPR003591 -
Bisa02g1982 988 SMART LRR_typ_2 342 366 IPR003591 -
Bisa02g1982 988 SMART LRR_typ_2 390 414 IPR003591 -
Bisa02g1982 988 SMART LRR_typ_2 534 559 IPR003591 -
Bisa02g1982 988 SMART LRR_typ_2 100 125 IPR003591 -
Bisa02g1982 988 SMART LRR_typ_2 438 462 IPR003591 -
Bisa02g1982 988 SMART LRR_typ_2 148 172 IPR003591 -
Bisa02g1982 988 SMART LRR_typ_2 318 341 IPR003591 -
Bisa02g1982 988 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 779 983 - -
Bisa02g1982 988 Pfam Leucine rich repeat 126 186 IPR001611 GO:0005515
Bisa02g1982 988 Pfam Leucine rich repeat 368 427 IPR001611 GO:0005515
Bisa02g1982 988 Pfam Leucine rich repeat 304 355 IPR001611 GO:0005515
Bisa02g1982 988 Gene3D Ribonuclease Inhibitor 191 289 IPR032675 -
Bisa02g1982 988 FunFam Inactive leucine-rich repeat receptor-like protein kinase 393 583 - -
Bisa02g1982 988 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 330 975 - -
Bisa02g1982 988 CDD STKc_IRAK 706 975 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1982 Bisa-ChrBisa02 43025539 43029135 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1982 10 985 Receptor kinase-like Gene Family AT3G28040 61.386 0.0 1158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Bisa02g1982 Pkinase 2.8e-41 CL0016